Dylan Klein

A Label-Free Multi-Metric Pipeline for Benchmarking Single-Cell RNA-Sequencing Clustering and Testing the Reproducibility of Cell-Type Heterogeneity

The paper introduces a label-free pipeline to benchmark single-cell RNA-seq clustering and assesses the reproducibility of cell-type heterogeneity across different embeddings and resampling methods.

Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of marine parasites

The paper develops a computational workflow to analyze unassigned protist genetic barcodes across marine surveys, identifying spatio-temporal patterns in Syndiniales parasites.