Author

Elizabeth A. Nelson

University of VirginiaPrimary ORCID profile (0000-0002-1570-1083 · 3 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Elizabeth A. NelsoniD3 papers · Southern Methodist University

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Organism:mouse· 1

Frequent Co-Authors

Gloria SheynkmaniD· 2 shared Karen K. HirschiiD· 2 shared Anupreet Kour· 1 shared Ben T. JordaniD· 1 shared Bipul R. AcharyaiD· 1 shared Corina MarzianoiD· 1 shared Elizabeth TsengiD· 1 shared Erin D. JefferyiD· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersDevelopmental Biology

Gloria SheynkmanORCID

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2 papers

Recent·Most cited

Endothelial Cell Cycle State Determines Propensity for Arterial-Venous Fate

Nicholas W. Chavkin, Gaël Genet, Mathilde Poulet, Erin D. Jeffery, Corina Marziano, Nafiisha Genet, Hema H. Vasavada, Elizabeth A. Nelson, Bipul R. Acharya, Anupreet Kour, Jordon W. Aragon, Stephanie P. McDonnell, Mahalia Huba, Gloria Sheynkman, Kenneth Walsh, Karen K. Hirschi

This study shows that endothelial cell cycle states determine arterial-venous fate, with early G1 for venous and late G1 for arterial specification.

Nature Communications · Oct 6, 2022Peer-reviewedDevelopmental Biology

Transformation of alignment files improves performance of variant callers for long-read RNA sequencing data

Vladimir B. C. de Souza, Ben T. Jordan, Elizabeth Tseng, Elizabeth A. Nelson, Karen K. Hirschi, Gloria Sheynkman, Mark D. Robinson

The paper benchmarks variant callers on long-read RNA-seq data and proposes a pipeline to improve their performance using spliced alignment files.

bioRxiv · Feb 8, 2022 · PreprintBioinformatics