Author

F. Ruperti

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Organism:non-human primate· 2 Research Focus:protein folding & dynamics· 2 Research Focus:cell-cell communication· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:protein structure· 1

Frequent Co-Authors

C. S. Asensio· 1 shared D. Anselmetti· 1 shared D. Arendt· 1 shared J. Musser· 1 shared M. Dzieciatkowska· 1 shared M. Mirdita· 1 shared M. S. Pankey· 1 shared M. Steinegger· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBiochemistry

C. S. Asensio

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2 papers

Recent·Most cited

Proteomic analysis of the Aggregation Factor from the sponge Clathria (Microciona) prolifera suggests an ancient protein domain toolkit for allorecognition in animals

F. Ruperti, M. Dzieciatkowska, M. S. Pankey, C. S. Asensio, D. Anselmetti, X. Fernandez-Busquets, S. A. Nichols

The paper uses proteomics to identify AF components in sponges and finds conserved domains suggesting an ancient toolkit for cell adhesion and allorecognition.

bioRxiv · Apr 19, 2024 · PreprintBiochemistry

Beyond sequence similarity: cross-phyla protein annotation by structural prediction and alignment

F. Ruperti, N. Papadopoulos, J. Musser, M. Mirdita, M. Steinegger, D. Arendt

This paper introduces MorF, a tool using structural similarity to annotate protein functions in sponges, improving annotation beyond sequence-based methods.

bioRxiv · Jul 5, 2022Evolutionary Biology