Author

F. Salmen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Cancer Biology· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Approach:deep learning· 2 Organism:human· 2 Research Focus:spatial domain detection· 2 Assay:spatial transcriptomics· 2 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1

Frequent Co-Authors

A. Borg· 2 shared A. Ehinger· 2 shared J. Frisen· 2 shared J. Lundeberg· 2 shared L. Larsson· 2 shared L. Stenbeck· 2 shared A. E. V. Andersson· 1 shared A. Swarbrick· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersCancer Biology

A. Borg

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Identification of the stress granule transcriptome via RNA-editing in single cells and in vivo

W. v. Leeuwen, M. VanInsberghe, N. Battich, F. Salmen, A. van Oudenaarden, C. Rabouille

The paper introduces a method to identify stress granule RNAs using RNA-editing in single cells and tissues, revealing 398 neuronal stress granule mRNAs in Drosophila.

bioRxiv · Jun 21, 2021Cell Biology

Spatial Deconvolution of HER2-positive Breast Tumors Reveals Novel Intercellular Relationships

A. E. V. Andersson, L. Larsson, L. Stenbeck, F. Salmen, A. Ehinger, S. Z. Wu, G. Al-Eryani, D. L. Roden, A. Swarbrick, A. Borg, J. Frisen, C. Engblom, J. Lundeberg

This study uses spatial transcriptomics to analyze HER2-positive breast tumors, revealing novel intercellular relationships and developing a model for tertiary lymphoid structures across tissues.

bioRxiv · Jul 14, 2020 · PreprintCancer Biology

Multidimensional transcriptomics provides detailed information about immune cell distribution and identity in HER2+ breast tumors

F. Salmen, S. Vickovic, L. Larsson, L. Stenbeck, J. Vallon-Christersson, A. Ehinger, J. Hakkinen, A. Borg, J. Frisen, P. Stahl, J. Lundeberg

This study uses multidimensional transcriptomics to analyze immune cell distribution and identity in HER2+ breast tumors, revealing spatial heterogeneity and interpatient differences in immune infiltration.

bioRxiv · Jun 30, 2018 · PreprintCancer Biology