Author

G. Lima-Mendez

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

J. Raes· 2 shared R. Logares· 2 shared A. K. Krabberod· 1 shared A. Kamau· 1 shared A. M. Varani· 1 shared B. G. Hallet· 1 shared C. Bowler· 1 shared C. M. Duarte· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMicrobiology

J. Raes

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Disentangling environmental effects in microbial association networks

I. M. Deutschmann, G. Lima-Mendez, A. K. Krabberod, J. Raes, S. M. Vallina, K. Faust, R. Logares

This paper introduces EnDED, a method to identify environmentally-driven associations in microbial networks, showing that combining methods reduces false positives in simulated and real marine microbial data.

bioRxiv · Jul 13, 2021Microbiology

Toxin-antitoxin gene pairs found in Tn3family transposons appear to be an integral part of the transposition module

G. Lima-Mendez, D. Oliveira Alvarenga, K. Ross, B. G. Hallet, L. Van Melderen, A. M. Varani, M. Chandler

The paper identifies toxin-antitoxin gene pairs in Tn3 family transposons, suggesting they may regulate transposition stability and expression.

bioRxiv · Mar 2, 2020Microbiology

Metabolic Architecture of the Deep Ocean Microbiome

S. G. Acinas, P. Sanchez, G. Salazar, F. M. Cornejo-Castillo, M. Sebastian, R. Logares, S. Sunagawa, P. Hingamp, H. Ogata, G. Lima-Mendez, S. Roux, J. M. Gonzalez, J. M. Arrieta, I. S. Alam, A. Kamau, , J. M. Gasol

The paper analyzes deep ocean microbial metagenomes to reveal functional diversity and metabolic strategies in the dark ocean.

bioRxiv · May 13, 2019Microbiology