Author

K. Faust

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5 Ecology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 6 Organism:human· 3 Assay:metagenomics· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Assay:metabolomics· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

J. Raes· 3 shared A. Krzynowek· 2 shared A. Geirnaert· 1 shared A. K. Krabberod· 1 shared B. Khakimov· 1 shared B. Liu· 1 shared B. Van de Moortel· 1 shared C. Shi· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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3 shared papersMicrobiology

J. Raes

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Effects of microplastics on Daphnia-associated microbiomes in situ and in vitro

A. Krzynowek, B. Van de Moortel, N. Pichler, I. Vanoverberghe, J. Lapere, L. Jenisch, D. Deloof, W. Thielemans, K. Muylaert, M. Dusselier, D. Springael, K. Faust, E. Decaestecker

This study examines how microplastics affect Daphnia-associated microbiomes in urban and natural freshwater environments, finding changes in community composition and functional traits linked to MP levels.

bioRxiv · Jun 28, 2024Ecology

Starvation responses impact interaction dynamics of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis

B. Liu, D. R. Garza, D. Gonze, A. Krzynowek, K. Simoens, K. Bernaerts, A. Geirnaert, K. Faust

This study examines how nutrient scarcity affects the interaction dynamics between Bacteroides thetaiotaomicron and Roseburia intestinalis using in vitro experiments and computational modeling.

bioRxiv · Feb 2, 2023 · PreprintMicrobiology

Disentangling environmental effects in microbial association networks

I. M. Deutschmann, G. Lima-Mendez, A. K. Krabberod, J. Raes, S. M. Vallina, K. Faust, R. Logares

This paper introduces EnDED, a method to identify environmentally-driven associations in microbial networks, showing that combining methods reduces false positives in simulated and real marine microbial data.

bioRxiv · Jul 13, 2021Microbiology

Successional stages in infant gut microbiota maturation

L. Beller, W. Deboutte, G. Falony, S. Vieira Silva, R. Tito, M. Valles-Colomer, L. Rymenans, D. Jansen, L. Van Espen, M. I. Papadaki, C. Shi, K. C. Yinda, M. Zeller, K. Faust, M. Van Ranst, , J. Matthijnssens

The paper investigates infant gut microbiota maturation over the first year, identifying three conserved stages and associating disease and antibiotic use with stage regression.

bioRxiv · Jun 25, 2021Microbiology

A framework for comparing microbial networks reveals core associations

L. Rottjers, D. Vandeputte, J. Raes, K. Faust

The paper introduces a framework to compare microbial networks and identifies core associations that are consistently present across different networks.

bioRxiv · Oct 5, 2020 · PreprintMicrobiology

Gut Mycobiome Dysbiosis Is Linked to Hypertriglyceridemia among Home Dwelling Elderly Danes

H. F. AHMAD, J. L. Castro Mejia, L. Krych, B. Khakimov, W. Kot, R. L. Bechshoft, S. Reitelseder, G. W. Hojfeldt, S. B. Engelsen, L. Holm, K. Faust, D. S. Nielsen

This study links gut mycobiome dysbiosis to hypertriglyceridemia in elderly Danes by analyzing dietary intake, fungal composition, and metabolomic data.

bioRxiv · Apr 16, 2020 · PreprintMicrobiology