Author

G. Stein-O'Brien

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

L. Danilova· 2 shared A. B. Pucsek· 1 shared A. Favorov· 1 shared A. Gupta· 1 shared A. Kimmelman· 1 shared B. Kinny-Koster· 1 shared C. Cherry· 1 shared C. L. Wolfgang· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersCancer Biology

L. Danilova

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2 papers

Recent·Most cited

Inflammatory Signaling in Pancreatic Cancer Transfers Between a Single-cell RNA Sequencing Atlas and Co-Culture

B. Kinny-Koster, S. Guinn, J. A. Tandurella, J. T. Mitchell, D. N. Sidiropoulos, M. Loth, M. R. Lyman, A. B. Pucsek, T. T. Seppala, C. Cherry, R. Suri, H. Zlomke, J. He, C. L. Wolfgang, J. Yu, , J. W. Zimmerman

This paper integrates single-cell RNA sequencing data with organoid co-cultures to study inflammatory signaling in pancreatic cancer and validates findings through transfer learning and mechanistic experiments.

bioRxiv · Jul 14, 2022 · PreprintCancer Biology

Epigenetic Regulation of Gene Expression in Cancer: Techniques, Resources, and Analysis

L. Kagohara, G. Stein-O'Brien, D. Kelley, E. Flam, H. Wick, L. Danilova, H. Easwaran, A. Favorov, J. Qian, D. Gaykalova, E. Fertig

This review discusses epigenetic regulation in cancer, focusing on DNA methylation, chromatin structure, and bioinformatics tools for analyzing high-throughput epigenetic data.

bioRxiv · Mar 8, 2017Cancer Biology