Author

Gabriel C. Fonseca

Baylor College of Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Assay:CRISPR screen· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:spatial transcriptomics· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Alex K. Sabo· 1 shared Alexander B. RosenbergiD· 1 shared Angela M YuiD· 1 shared Charles M. RocoiD· 1 shared Georg SeeligiD· 1 shared Johannes LinderiD· 1 shared Madelyn R. Shelby· 1 shared Nicholas BogardiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperSynthetic Biology

Alex K. Sabo

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1 paper

Recent·Most cited

Massively parallel assay of human splice variants reveals cis-regulatory drivers of disease-associated and cell type-specific splicing regulation

Samantha E. Koplik, Angela M Yu, Madelyn R. Shelby, Gabriel C. Fonseca, Charles M. Roco, Yue Zhang, Nicholas Bogard, Alex K. Sabo, Alexander B. Rosenberg, Johannes Linder, Georg Seelig

The paper develops COMPASS, a method to assess splicing variant effects across cell types, identifying disease-associated variants and cell type-specific splicing programs.

bioRxiv · Oct 12, 2025 · PreprintSynthetic Biology