Integrated inference of cancer gene expression from cell-free plasma chromatin
Gunsagar Singh Gulati, Damien Vasseur, Rashad Nawfal, Shahabeddin Sotudian, Karl Semaan, Marc Eid, Ji-Heui Seo, Noa Phillips, John Canniff, Hunter Savignano, Surya B. Chhetri, Zhenjie Jin, Yukun Ou, Mohamed Amine Bani, Gwo‐Shu Mary Lee, , Matthew L. Freedman
APEX infers cancer gene expression from plasma cfChIP-seq data, outperforming existing methods and enabling subtype classification and biomarker identification.
bioRxiv · Feb 19, 2026 · PreprintGenomics