Author

Gillian Berglund

Howard Hughes Medical Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 2 Genetics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:Drosophila· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Assay:imaging· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1

Frequent Co-Authors

Michael RosbashiD· 3 shared Albert D. YuiD· 2 shared Pranav OjhaiD· 2 shared Cara Theresia PageriD· 1 shared Christopher Allum· 1 shared Claudia D. LennoniD· 1 shared Daniel ShiniD· 1 shared Evelyn KeeferiD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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3 shared papersNeuroscience

Michael RosbashORCID

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Author profile →

4 papers

Recent·Most cited

Epigenetic characterization and manipulation of rare circadian neuron subtypes

Pranav Ojha, Gillian Berglund, Albert D. Yu, Shlesha Richhariya, Michael Rosbash

El-INTACT nuclear purification gives clean ATAC-seq from ~120 Drosophila clock neurons and 16 PDF neurons, revealing cell-type-specific Clk enhancers; disrupting two renders flies arrhythmic.

bioRxiv · Sep 21, 2026 · PreprintGenetics✦ In-depth digest

Cell-type-specific circadian and light-responsive transcriptional dynamics in adult Drosophila neurons

Gillian Berglund, Pranav Ojha, Maria Ivanova, Melina Pérez Torres, Michael Rosbash

The paper profiles circadian neuron transcriptomes across timepoints under different light conditions to reveal transcriptional and light-dependent gene regulation in Drosophila.

Proceedings of the National Academy of Sciences · Sep 8, 2026Peer-reviewedNeuroscience

Zika virus infection in a cell culture model reflects the transcriptomic signatures in patients.

Gillian Berglund, Claudia D. Lennon, Pheonah Badu, J. Andrew Berglund, Cara Theresia Pager

This study compares transcriptomic changes in ZIKV-infected cell cultures with patient RNA-seq data, finding similarities in transcriptional profiles but limited overlap in alternative splicing.

Microorganisms · Jul 22, 2024Peer-reviewedMicrobiology

FlyBox: A Flexible Open-Source Behavior Monitoring System

Jasmine Quynh Le, Albert D. Yu, Xihuimin Dai, Christopher Allum, Olivia Jo Bradley, S. C. “Mack” McAneney, Florian Schwarzinger, Zachary Sherman, Jose E. Alvarez, Gillian Berglund, Daniel Shin, Evelyn Keefer, Lawrence Neeley, Michael Rosbash

The paper introduces FlyBox, an open-source behavior monitoring system for Drosophila that is affordable and customizable, along with FlyBoxScanner software for activity monitoring.

bioRxiv · May 15, 2024 · PreprintNeuroscience