Author

Haoyun Zhang

University of Michigan;

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1

Frequent Co-Authors

Baoxiang Zhuang· 1 shared Chunjie Xu· 1 shared Fenghua Zhou· 1 shared Ha T.H. VuiD· 1 shared Haoxuan ZengiD· 1 shared Huilin YangiD· 1 shared Jiajun ZhuiD· 1 shared Jie LiuiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperNeuroscience

Baoxiang Zhuang

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Author profile →

2 papers

Recent·Most cited

A single-cell multimodal foundation model enables cross modality analysis between transcriptome and chromatin

Xinyu Bao, Jiajun Zhu, Xiangchen Song, Xiaoshan Zhang, Haoxuan Zeng, Ha T.H. Vu, Haoyun Zhang, Zheyu Zhang, Mingnan Yao, Mengdong Liang, Kai Liu, Stephen CJ Parker, Shuibing Chen, Jie Liu

MUTUAL enables cross-modality analysis between transcriptome and chromatin by learning a shared RNA-ATAC space from multiome data without refitting.

bioRxiv · Nov 2, 2026 · PreprintBioinformatics

METTL3-mediated m6A modification alleviates skeletal muscle atrophy in ALS by regulating ACSL1-dependent triglyceride metabolism

Qiupeng Yan, Lingyun Zhang, Xue Bai, Yingjun Guan, Haoyun Zhang, Jinmeng Liu, Baoxiang Zhuang, Mu Li, Xue Zhang, 陈晓苏, Xiaonan Ma, Chunjie Xu, Huilin Yang, Xin Huang, Fenghua Zhou, Yanchun Chen

This study identifies METTL3-mediated m6A modification as a regulator of triglyceride metabolism in ALS skeletal muscle, alleviating atrophy through ACSL1 expression.

bioRxiv · Oct 24, 2026 · PreprintNeuroscience