Author

Xue Bai

Chinese Academy of Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Approach:contrastive learning· 1

Frequent Co-Authors

Baoxiang Zhuang· 1 shared C. Robson Simon· 1 shared Chenghai Xue· 1 shared Chengpei Zhu· 1 shared Chunjie Xu· 1 shared Cuiping LiiD· 1 shared Fei YangiD· 1 shared Fenghua Zhou· 1 shared

Activity by Year

2016-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperNeuroscience

Baoxiang Zhuang

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Author profile →

3 papers

Recent·Most cited

METTL3-mediated m6A modification alleviates skeletal muscle atrophy in ALS by regulating ACSL1-dependent triglyceride metabolism

Qiupeng Yan, Lingyun Zhang, Xue Bai, Yingjun Guan, Haoyun Zhang, Jinmeng Liu, Baoxiang Zhuang, Mu Li, Xue Zhang, 陈晓苏, Xiaonan Ma, Chunjie Xu, Huilin Yang, Xin Huang, Fenghua Zhou, Yanchun Chen

This study identifies METTL3-mediated m6A modification as a regulator of triglyceride metabolism in ALS skeletal muscle, alleviating atrophy through ACSL1 expression.

bioRxiv · Oct 24, 2026 · PreprintNeuroscience

ImmuneLens: linking transcriptional states and TCR clonotypes through disentangled multimodal learning

Zhijian Duan, Yi Wang, Cuiping Li, Guochao Li, Yongrong Cao, Xue Bai, Fei Yang, Shuhui Song

ImmuneLens links transcriptional states and TCR clonotypes using disentangled multimodal learning to improve antigen-specificity prediction and reveal T cell heterogeneity in immunotherapy.

bioRxiv · Sep 14, 2026 · PreprintBioinformatics

The landscape of gene fusions in hepatocellular carcinoma

Chengpei Zhu, Yanling Lv, Liangcai Wu, Jinxia Guan, Xue Bai, Jianzhen Lin, Tingting Liu, Zhang Haohai, Wang Anqiang, Xie Yuan, Wan Xueshuai, Zheng Yongchang, Yang Xiaobo, Miao Ruoyu, C. Robson Simon, , Haitao Zhao

This study identifies gene fusions in hepatocellular carcinoma (HCC) using RNA sequencing and validation, finding 43 recurrent fusions with three annotated as disease-related and 19 novel fusions, including potential therapeutic biomarkers.

bioRxiv · May 25, 2016 · PreprintCancer Biology