Author

Henri Adreit

Centre de Coopération Internationale en Recherche Agronomique pour le Développement

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Evolutionary Biology· 1 Genetics· 1 Microbiology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Approach:deep learning· 2 Organism:fungi (other)· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

Didier TharreauiD· 5 shared Elisabeth FournieriD· 4 shared Huichuan HuangiD· 2 shared Nicolas PonceletiD· 2 shared Sébastien RaveliD· 2 shared Abdoul‐Raouf Sayadi MaazouiD· 1 shared Adrien RieuxiD· 1 shared Alexandre LassagneiD· 1 shared

Activity by Year

2024-2026 · peak 5/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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5 shared papersPlant Biology

Didier TharreauORCID

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Towards operational epidemiology of Pyricularia oryzae in sports turf: contribution of a multi-matrix molecular monitoring strategy at stadium scale

Sarah Saadi, Cécile Gruet, Henri Adreit, Nicolas Poncelet, Jérémy Di Mattia, Olivier Courot, Didier Tharreau

This study develops a digital PCR tool for early detection of Pyricularia oryzae in sports turfgrass, showing high sensitivity and identifying roots as a key matrix for monitoring.

bioRxiv · Oct 1, 2026 · PreprintPlant Biology

Monoclonal anti-dsRNA antibody-based metagenomics (MADAM) reveal Pyricularia oryzae mycovirome

Laurence Blondin, Denis Filloux, Emmanuel Fernandez, Henri Adreit, Huichuan Huang, Elisabeth Fournier, Didier Tharreau, Philippe Roumagnac

This paper introduces MADAM, a metagenomics approach for detecting fungal viruses, and identifies 18 RNA viruses in Pyricularia oryzae.

Peer Community Journal · Sep 16, 2026Peer-reviewedMicrobiology

MIRA: an open source and user-friendly software to automate counting and sizing of fungal spores

Joffrey Mejias, Henri Adreit, Anaëlle Blanc, Nadia Lubin, Cassandre Jolivet, Valentin Guyot, Oïana Brayle, Nicolas Poncelet, Elisabeth Fournier, Emmanuel Wicker, Jean Philippe Carlier, Didier Tharreau, Sébastien Ravel

MIRA automates fungal spore counting and sizing using YOLO deep learning, achieving high accuracy and efficiency compared to manual methods.

bioRxiv · Aug 7, 2026 · PreprintPlant Biology

Population structure of the rice blast fungus Pyricularia oryzae in the context of elevated host heterogeneity

Pierre-Michel Marty, Henri Adreit, Sandrine Cros‐Arteil, S. Guillou, Sébastien Ravel, Adrien Rieux, Huichuan Huang, Lieu Thi Le, Jean‐Benoit Morel, Stéphane De Mita, Elisabeth Fournier

This study analyzes P. oryzae genomes from the Yuanyang Terraces to show increased genomic diversity and lineage complexity compared to global populations, suggesting long-term crop diversity drives pathogen adaptation.

bioRxiv · Jun 20, 2026 · PreprintEvolutionary Biology

Cassava witches' broom disease in French Guiana: a threat to cacao cultivation and its biodiversity?

Abdoul‐Raouf Sayadi Maazou, Fabien Doaré, Eliane Louisanna, Hélène Vignes, Didier Tharreau, Henri Adreit, Clara Cayron, Gerben Martijn Ten Hoopen

The paper investigates the potential threat of Cassava witches' broom disease fungus to cacao trees in French Guiana through cross-pathogenicity trials and PCR diagnostics.

bioRxiv · Apr 8, 2026 · PreprintPathology

Identification of genetic bases of male fertility in Pyricularia oryzae by Genome Wide Association Study (GWAS).

Alexandre Lassagne, Henri Adreit, Fabienne Malagnac, Florian Charriat, Thomas Dumartinet, Hugues Parrinello, Anne‐Alicia Gonzalez, Didier Tharreau, Elisabeth Fournier

This study identifies a genomic region associated with microconidia production in Pyricularia oryzae using GWAS, suggesting potential genes involved in male fertility.

bioRxiv · Apr 25, 2024 · PreprintGenetics