Author

Olivier Courot

ORCID 0000-0002-5007-0272Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Ecology· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Cécile GruetiD· 3 shared Jérémy Di MattiaiD· 2 shared Sarah Saadi· 2 shared Albin FontaineiD· 1 shared Alexandre Lepeule· 1 shared Anais Fossot· 1 shared Antoine MignotteiD· 1 shared Caroline Araiz· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersPlant Biology

Cécile GruetORCID

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3 papers

Recent·Most cited

Plant BiologybioRxivPreprintOct 1, 2026

Towards operational epidemiology of Pyricularia oryzae in sports turf: contribution of a multi-matrix molecular monitoring strategy at stadium scale

Sarah Saadi, Cécile Gruet, Henri Adreit…·Didier Tharreau

This study develops a digital PCR tool for early detection of Pyricularia oryzae in sports turfgrass, showing high sensitivity and identifying roots as a key matrix for monitoring.

DOI 10.64898/2026.09.30.755619

experimental assay

𝕏 PostBluesky

EcologybioRxivPreprintFeb 3, 2026

Early-warning surveillance of West Nile and Usutu viruses in water and mosquito excreta using digital PCR

Julien Mocq, Julie Raymond, Karine Bolloré…·Yannick Simonin

This paper detects West Nile and Usutu viruses in environmental samples using digital PCR, providing early warnings for public health interventions.

1 citation

experimental assayhost-pathogen & immune response

𝕏 PostBluesky

MicrobiologybioRxivPreprintApr 23, 2024

First application of digital-PCR in oenology for the specific detection of intact cells of Brettanomyces bruxellensis in the winemaking process

Cécile Gruet, Jérémy Di Mattia, Magali Hiaumet…·Olivier Courot

This paper develops a digital-PCR method for specific detection of intact Brettanomyces bruxellensis cells in winemaking, with an optimized DNA extraction protocol and successful application in contaminated samples.

DOI 10.1101/2024.04.23.590681

DNA methylationexperimental assay

𝕏 PostBluesky