Sébastien Ravel

MIRA automates fungal spore counting and sizing using YOLO deep learning, achieving high accuracy and efficiency compared to manual methods.

The paper analyzes the population structure and genetic diversity of Foc TR4 using whole genome sequences to trace its origin and migration patterns.

GraTools is a command-line tool for manipulating pangenome variation graphs, enabling efficient subgraph extraction, sequence retrieval, and analysis of genomic diversity.

This study analyzes P. oryzae genomes from the Yuanyang Terraces to show increased genomic diversity and lineage complexity compared to global populations, suggesting long-term crop diversity drives pathogen adaptation.

CulebrONT is a pipeline that streamlines long-read genome assembly by integrating multiple assemblers and providing quality metrics.