Fabienne Malagnac

The paper presents Hi-C data and 3D models for Podospora anserina to study its chromosomal spatial organization and aid multi-omics integration.

The paper examines centromere evolution in Podospora species, finding that the loss of the RIP defense system in P. pseudocomata correlates with smaller centromeres and a shift in transposable element composition.

This study identifies five major transcriptomic patterns during sexual reproduction in Podospora anserina and characterizes genes and regulators involved in key biological processes.

This study identifies a genomic region associated with microconidia production in Pyricularia oryzae using GWAS, suggesting potential genes involved in male fertility.

The paper develops a workflow to generate 3D chromosome models from Hi-C data and applies it to fungal species, revealing new structural insights.

The paper uses multiple RNA-seq datasets to improve the functional annotation of Podospora anserina genome by identifying UTRs, alternative splicing, and novel transcriptionally active regions.

The paper investigates the role of H3K27me3 and H3K9me3 histone modifications in the fungus Podospora anserina, showing their distinct functions in development and gene silencing.

This study identifies a DNA methyltransferase gene in Podospora anserina that is essential for sexual development, showing its role in regulating gene expression and interacting with mating-type pathways.