Author

Huihui Zhang

Nanjing Agricultural University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Assay:long-read sequencing· 1 Assay:metabolomics· 1 Assay:metagenomics· 1

Frequent Co-Authors

Ákos T. KovácsiD· 1 shared Alysha Elliott· 1 shared Devika GanesamoorthyiD· 1 shared Jiyu XieiD· 1 shared Kun Duan· 1 shared Lachlan CoiniD· 1 shared Matthew Cooper· 1 shared Mikael Lenz StrubeiD· 1 shared

Activity by Year

2016-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperMicrobiology

Ákos T. KovácsORCID

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2 papers

Recent·Most cited

Metabolic exchange and siderophore sharing underlie emergent biofilm synergism

Jiyu Xie, Xinli Sun, Viktor Hesselberg-Thomsen, Kun Duan, Huihui Zhang, Weibing Xun, Nan Zhang, Mikael Lenz Strube, Qirong Shen, Ákos T. Kovács, Ruifu Zhang, Zhihui Xu

The paper identifies metabolic exchange and siderophore sharing mechanisms that enhance biofilm formation among three rhizosphere bacterial species and improve plant growth in iron-depleted soil.

bioRxiv · Feb 24, 2026 · PreprintMicrobiology

Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing

Minh Duc Cao, Devika Ganesamoorthy, Alysha Elliott, Huihui Zhang, Matthew Cooper, Lachlan Coin

This paper presents streaming algorithms for real-time MinION sequencing to identify pathogens and antibiotic resistance, demonstrating rapid species and resistance profile detection.

bioRxiv · Apr 6, 2016Bioinformatics