Author

I. A. Shagina

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Organism:human· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

D. M. Chudakov· 2 shared A. Franke· 1 shared A. Komkov· 1 shared A. S. Fedosova· 1 shared B. Minasian· 1 shared D. A. Price· 1 shared D. B. Staroverov· 1 shared D. K. Lukyanov· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersImmunology

D. M. Chudakov

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2 papers

Recent·Most cited

Repertoire-based mapping and time-tracking of helper T cell subsets in scRNA-Seq

D. K. Lukyanov, V. V. Kriukova, K. Ladell, I. A. Shagina, D. B. Staroverov, B. Minasian, A. S. Fedosova, P. Shelyakin, O. N. Suchalko, A. Komkov, K. A. Blagodatskikh, K. L. Miners, O. V. Britanova, A. Franke, D. A. Price, D. M. Chudakov

This paper introduces TCR-Track, a method to map and track helper T cell subsets in scRNA-Seq data, revealing their clonal relationships and functional programs over time.

bioRxiv · Oct 24, 2023Immunology

Systematic evaluation of intratumoral and peripheral BCR repertoires in three cancers

S. V. Krasik, E. A. Bryushkova, G. V. Sharonov, D. S. Myalik, E. V. Shurganova, D. V. Komarov, I. A. Shagina, P. S. Shpudeiko, M. A. Turchaninova, M. T. Vakhitova, I. V. Samoylenko, D. T. Marinov, L. V. Demidov, V. E. Zagainov, D. M. Chudakov, E. O. Serebrovskaya

This study evaluates BCR repertoires in tumors, draining lymph nodes, and blood of cancer patients, revealing differences in clonotype expansion, hypermutation, and CDR-H3 properties.

bioRxiv · Apr 16, 2023Immunology