Author

J. D. Wong

University of Toronto

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:software / tool· 1

Frequent Co-Authors

A. Bashyal· 1 shared Asha Rostamianfar· 1 shared C. M. Hurley· 1 shared Changjiang Xu· 1 shared Christian Tannus-Lopes· 1 shared D. Kraut· 1 shared Daniele MericoiD· 1 shared E. L. Reichard· 1 shared

Activity by Year

2019-2019 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBiochemistry

A. Bashyal

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2 papers

Recent·Most cited

Ubiquitin receptors are required for substrate-mediated activation of the proteasome’s unfolding ability

M. D. Cundiff, C. M. Hurley, J. D. Wong, A. Bashyal, J. Rosenberg, E. L. Reichard, N. D. Nassif, J. Brodbelt, D. Kraut

This study identifies ubiquitin receptors as essential for substrate-mediated activation of the proteasome's unfolding ability, with Rpn13 playing the largest role.

bioRxiv · Mar 28, 2019Biochemistry

Pathway enrichment analysis of -omics data

Jüri Reimand, Ruth Isserlin, Véronique Voisin, Mike Kucera, Christian Tannus-Lopes, Asha Rostamianfar, Lina Wadi, Mona Meyer, J. D. Wong, Changjiang Xu, Daniele Merico, Gary D. Bader

Step-by-step protocol for interpreting omics gene lists via g:Profiler or GSEA enrichment testing, then grouping redundant enriched pathways into themes with Cytoscape Enrichment Map.

Nature Protocols · Jan 21, 2019Peer-reviewedBioinformatics✦ In-depth digest