Author

J. Haseloff

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 7 Bioengineering· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Research Focus:cell type annotation· 4 Assay:DNA methylation· 3 Assay:bulk RNA-seq· 2 Research Focus:development & morphogenesis· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Organism:non-human primate· 2

Frequent Co-Authors

E. Frangedakis· 5 shared J. Rever· 4 shared M. Tomaselli· 4 shared J. M. Hibberd· 3 shared M. Rebmann· 3 shared S. Sauret-Gueto· 3 shared J. L. Bowman· 2 shared K. Billakurthi· 2 shared

Activity by Year

2020-2023 · peak 6/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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5 shared papersPlant Biology

E. Frangedakis

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

Control of cell fate specification and patterning by an ancestral microRNA

A. Aguilar-Cruz, E. Flores-Sandoval, X. Gutierrez-Ramos, O. Oltehua-Lopez, A. E. Dorantes-Acosta, J. T. Trujillo, H. Kato, K. Ishizaki, R. A. Mosher, L. Dolan, D. Grimanelli, J. Haseloff, J. L. Bowman, M. A. Arteaga-Vazquez

The paper shows that MpDCL1a is essential for miRNA biogenesis and regulates auxin synthesis, influencing cell identity and body development in the last common ancestor of land plants.

bioRxiv · Sep 9, 2023 · PreprintPlant Biology

Synergistic control of chloroplast biogenesis by MYB-related and Golden2-like transcription factors

E. Frangedakis, N. Yelina, K. Billakurthi, T. B. Schreier, P. J. Dickinson, M. Tomaselli, J. Haseloff, J. M. Hibberd

The paper identifies MYB-related transcription factors as regulators of chloroplast biogenesis in liverworts and Arabidopsis, showing they work with GLK factors to control chloroplast development.

bioRxiv · Aug 11, 2023 · PreprintPlant Biology

An Enhancer Trap system to track developmental dynamics in Marchantia polymorpha

A. O. Marron, S. Sauret-Gueto, M. Rebmann, L. Silvestri, M. Tomaselli, J. Haseloff

The paper develops an enhancer trap system in Marchantia polymorpha to identify and characterize cell-type-specific markers, revealing new insights into thallus development and auxin responses.

bioRxiv · Jul 6, 2023Plant Biology

Mapping the landscape of transcription factor promoter activity during vegetative development in Marchantia

F. Romani, S. Sauret-Güeto, M. Rebmann, D. Annese, I. Bonter, M. Tomaselli, T. Dierschke, M. Delmans, E. Frangedakis, L. Silvestri, J. Rever, J. L. Bowman, I. Romani, J. Haseloff

The paper maps transcription factor promoter activity in Marchantia gametophyte meristems and provides an online database of expression patterns.

bioRxiv · Jun 17, 2023 · PreprintPlant Biology

An optimised transformation protocol for Anthoceros agrestis and three more hornwort species

M. Waller, E. Frangedakis, A. Marron, S. Sauret-Gueto, J. Rever, C. R. R. Sabbagh, J. M. Hibberd, J. Haseloff, K. Renzaglia, P. Szovenyi

The paper describes an optimized genetic transformation protocol for Anthoceros agrestis and three additional hornwort species, resulting in higher efficiency and new tools for cell biology studies.

The Plant Journal · Apr 11, 2023Peer-reviewedPlant Biology

Streamlined regulation of chloroplast development in the liverwort Marchantia polymorpha

N. E. Yelina, E. Frangedakis, Z. Wang, T. B. Schreier, J. Rever, M. Tomaselli, E. Forestier, K. Billakurthi, S. Ren, Y. Bai, J. Stewart-Wood, J. Haseloff, S. Zhong, J. M. Hibberd

The paper investigates chloroplast development regulation in liverwort Marchantia polymorpha, finding that GLK controls chloroplast biogenesis while GATA and SCL have no detectable roles.

bioRxiv · Jan 23, 2023Plant Biology

Decentralizing cell-free RNA sensing with the use of low-cost cell extracts

A. Arce, F. Guzman, C. Gandini, J. Puig, T. Matute, J. Haseloff, N. Dalchau, J. Molloy, K. Pardee, F. Federici

The paper develops low-cost cell-free RNA sensors using E. coli lysates for field-deployed biosensing, achieving performance comparable to commercial systems and enabling decentralized disease surveillance.

bioRxiv · May 29, 2021Bioengineering

Comparative analysis of early divergent land plants and construction of DNA tools for hyper-expression in Marchantia chloroplasts

E. Frangedakis, F. Guzman-Chavez, M. Rebmann, K. Markel, Y. Yu, A. Perraki, S. W. Tse, Y. Liu, J. Rever, S. Sauret-Gueto, B. Goffinet, H. Schneider, J. Haseloff

The paper maps chloroplast transcription patterns in Marchantia and identifies DNA tools for hyper-expression in chloroplasts by testing candidate binding sites for mRNA stabilization.

bioRxiv · Nov 27, 2020 · PreprintPlant Biology