Author

J. L. Bowman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 5 Biophysics· 1 Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Research Focus:cell type annotation· 5 Organism:plant (other)· 3 Assay:bulk RNA-seq· 2 Research Focus:clustering· 2 Research Focus:development & morphogenesis· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2

Frequent Co-Authors

F. Romani· 3 shared A. E. Dorantes-Acosta· 2 shared J. Haseloff· 2 shared K. Ishizaki· 2 shared M. A. Arteaga-Vazquez· 2 shared T. Dierschke· 2 shared A. Aguilar-Cruz· 1 shared A. Cruz Ramirez· 1 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersPlant Biology

F. Romani

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

Control of cell fate specification and patterning by an ancestral microRNA

A. Aguilar-Cruz, E. Flores-Sandoval, X. Gutierrez-Ramos, O. Oltehua-Lopez, A. E. Dorantes-Acosta, J. T. Trujillo, H. Kato, K. Ishizaki, R. A. Mosher, L. Dolan, D. Grimanelli, J. Haseloff, J. L. Bowman, M. A. Arteaga-Vazquez

The paper shows that MpDCL1a is essential for miRNA biogenesis and regulates auxin synthesis, influencing cell identity and body development in the last common ancestor of land plants.

bioRxiv · Sep 9, 2023 · PreprintPlant Biology

Mapping the landscape of transcription factor promoter activity during vegetative development in Marchantia

F. Romani, S. Sauret-Güeto, M. Rebmann, D. Annese, I. Bonter, M. Tomaselli, T. Dierschke, M. Delmans, E. Frangedakis, L. Silvestri, J. Rever, J. L. Bowman, I. Romani, J. Haseloff

The paper maps transcription factor promoter activity in Marchantia gametophyte meristems and provides an online database of expression patterns.

bioRxiv · Jun 17, 2023 · PreprintPlant Biology

MarpolBase Expression: A Web-based, Comprehensive Platform for Visualization and Analysis of Transcriptomes in the Liverwort Marchantia polymorpha

S. Kawamura, F. Romani, M. Yagura, T. Mochizuki, M. Sakamoto, S. Yamaoka, R. Nishihama, Y. Nakamura, K. T. Yamato, J. L. Bowman, T. Kohchi, Y. Tanizawa

The paper introduces MBEX, a web-based platform for analyzing and visualizing transcriptomes in Marchantia polymorpha, demonstrating its utility through oil body biogenesis analysis.

bioRxiv · Jun 3, 2022Plant Biology

Sequence-dependent mechanochemical coupling of helicase translocation and unwinding at single-nucleotide resolution.

A. H. Laszlo, J. M. Craig, M. Gavrilov, R. Tippana, I. C. Nova, J. R. Huang, H. C. Kim, S. J. Abell, M. deCampos-Stairiker, J. W. Mount, J. L. Bowman, K. S. Baker, H. Higinbotham, D. Bobrovnikov, T. Ha, J. H. Gundlach

This study uses SPRNT to analyze how DNA sequence affects PcrA helicase kinetics during translocation and unwinding at single-nucleotide resolution.

bioRxiv · Feb 10, 2022Biophysics

Living apart if you can - how genetically and developmentally controlled sex has shaped the evolution of liverworts

X. He, J. R. Flores, Y. Sun, J. L. Bowman

This study investigates the evolutionary mechanisms of sexual systems in liverworts, showing dioicy is ancestral and more stable than monoicy, driven by genetic and environmental factors.

bioRxiv · Feb 8, 2021 · PreprintEvolutionary Biology

Transcriptional and morpho-physiological responses of Marchantia polymorpha upon phosphate starvation

F. Rico-Resendiz, S. A. Cervantez-Perez, A. Espinal-Centeno, M. Dipp-Alvarez, A. Oropeza-Aburto, E. Hurtado-Bautista, A. Cruz-Hernandez, J. L. bowman, K. Ishizaki, M. Arteaga-Vazquez, L. Herrera-Estrella, A. Cruz Ramirez

This study investigates how Marchantia polymorpha responds to phosphate starvation through transcriptional and morpho-physiological changes, identifying key genes and pathways involved in Pi acquisition and conservation.

bioRxiv · Sep 16, 2020Plant Biology

Oil body formation in Marchantia polymorpha is controlled by MpC1HDZ and serves as a defense against arthropod herbivores

F. Romani, E. Banic, S. N. Florent, T. Kanazawa, J. Q. D. Goodger, R. Mentink, T. Dierschke, S. Zachgo, T. Ueda, J. L. Bowman, M. Tsiantis, J. E. Moreno

This study identifies MpC1HDZ as a transcription factor controlling oil body formation in liverworts, which functions as a defense against herbivores rather than abiotic stress.

bioRxiv · Mar 2, 2020Plant Biology

Marchantia liverworts as a proxy to plants basal microbiomes.

L. D. Alcaraz, M. Peimbert, A. E. Dorantes-Acosta, J. L. Bowman, M. A. Arteaga-Vazquez

This study analyzes the microbiomes of Marchantia liverworts using 16S rRNA sequencing to compare wild and in vitro plants, identifying conserved and divergent microbial communities and their potential roles in plant health.

bioRxiv · Jan 28, 2017Microbiology