Author

J. K. Colbourne

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 2 Evolutionary Biology· 2 Zoology· 1

Signature Assays, Organisms & Methods

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Organism:Drosophila· 4 Research Focus:cell type annotation· 2 Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:contrastive learning· 1

Frequent Co-Authors

L. Orsini· 2 shared A. Rago· 1 shared A. Y. Lin· 1 shared C. E. Jackson· 1 shared C. L. Osburn· 1 shared C. R. Zaino· 1 shared D. Frisch· 1 shared D. X. Vanselow· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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2 shared papersEcology

L. Orsini

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

100 years of anthropogenic impact causes changes in freshwater functional biodiversity

N. Eastwood, J. Zhou, R. Derelle, M. A.-E. Abdallah, W. A. Stubbings, Y. Jia, S. E. Crawford, T. A. Davidson, J. K. Colbourne, S. Creer, H. Bik, H. Hollert, L. Orsini

The paper uses AI to analyze 100 years of freshwater biodiversity data, showing that insecticides, fungicides, and climate factors explain most functional biodiversity changes.

bioRxiv · Feb 26, 2023Ecology

A web-based histology atlas for the freshwater sentinel species Daphnia magna

M. S. Ngu, D. X. Vanselow, C. R. Zaino, A. Y. Lin, J. E. Copper, M. Beaton, L. Orsini, J. K. Colbourne, K. C. Cheng, K. C. Ang

The paper introduces a web-based histology atlas for Daphnia magna to provide baseline anatomical knowledge for toxicological studies and integrate molecular and phenotypic data.

bioRxiv · Mar 9, 2022 · PreprintZoology

Chromosomal rearrangements preserve adaptive divergence in ecological speciation

C. E. Jackson, S. Xu, Z. Ye, M. E. Pfrender, M. Lynch, J. K. Colbourne, J. R. Shaw

The paper analyzes chromosomal rearrangements in Daphnia species to show their role in preserving adaptive divergence during ecological speciation.

bioRxiv · Aug 20, 2021 · PreprintEvolutionary Biology

Centennial clonal stability of asexual Daphnia in Greenland lakes despite climate variability

M. Dane, N. J. Anderson, C. L. Osburn, J. K. Colbourne, D. Frisch

This study examines the genetic stability of asexual Daphnia populations in Greenland lakes over 200-300 years despite environmental changes, finding little genetic shift in two lakes.

bioRxiv · Jul 22, 2020Ecology

Sex biased expression and co-expression networks in development, using the hymenopteran Nasonia vitripennis

A. Rago, J. H. Werren, J. K. Colbourne

The paper examines sex-biased gene expression and co-expression networks in Nasonia vitripennis across developmental stages, identifying sex determination candidates and network-specific regulatory genes.

bioRxiv · Feb 5, 2019Evolutionary Biology