Author

J. Matsumoto

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Animal Behavior & Cognition· 1 Microbiology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Organism:human· 4 Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Assay:imaging· 2 Approach:statistical model· 2 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

A. Kaneko· 1 shared B. Reyes· 1 shared C. Olson· 1 shared E. Y. Hsiao· 1 shared G. R. Lum· 1 shared H. Akatsu· 1 shared H. Nakanishi· 1 shared H. Nishijo· 1 shared

Activity by Year

2018-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperAnimal Behavior & Cognition

A. Kaneko

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5 papers

Recent·Most cited

Micropatterned neural induction with heat-inactivated extracellular matrix protein by on-demand high-speed laser

Yohei Hayashi, J. Matsumoto, Kimio Sumaru

This paper develops a laser-based micropatterning method to create flexible, size-dependent neural structures from hiPSCs for tissue engineering and teratogenic testing.

Cytotherapy · Apr 30, 2026Peer-reviewedBioengineering

Three-dimensional markerless motion capture of multiple freely behaving monkeys for automated characterization of social behavior

J. Matsumoto, T. Kaneko, K. Kimura, S. B. Negrete, J. Guo, N. Suda-Hashimoto, A. Kaneko, M. Morimoto, H. Nishimaru, T. Setogawa, Y. Go, T. Shibata, H. Nishijo, M. Takada, K.-i. Inoue

This paper develops a 3D markerless motion capture system for tracking multiple freely behaving monkeys to automate social behavior analysis.

bioRxiv · Sep 13, 2023Animal Behavior & Cognition

Ketogenic diet therapy for pediatric epilepsy is associated with alterations in the human gut microbiome that confer seizure resistance in mice

G. R. Lum, S. M. Ha, C. Olson, M. Blencowe, J. Paramo, B. Reyes, J. Matsumoto, X. Yang, E. Y. Hsiao

This study shows that the ketogenic diet alters the gut microbiome in children with epilepsy, and transferring these microbes to mice increases seizure resistance.

bioRxiv · Mar 17, 2023Microbiology

Lipid-correlated alterations in the transcriptome are enriched in several specific pathways in the postmortem prefrontal cortex of Japanese patients with schizophrenia

W. Arihisa, T. Kondo, K. Yamaguchi, J. Matsumoto, H. Nakanishi, Y. Kunii, H. Akatsu, M. Hino, Y. Hashizume, S. Sato, S. Sato, S.-I. Niwa, H. Yabe, T. Sasaki, S. Shigenobu, M. Setou

The paper integrates transcriptome and lipidome data from postmortem prefrontal cortex samples of schizophrenia patients to identify lipid-correlated gene expression changes in specific pathways.

bioRxiv · Mar 14, 2022Pathology

Automated Adherent Cell Elimination by a High-Speed Laser Mediated by a Light-Responsive Polymer

Y. Hayashi, J. Matsumoto, S. Kumagai, K. Morishita, L. Xiang, Y. Kobori, S. Hori, M. Suzuki, T. Kanamori, K. Hotta, K. Sumaru

The paper develops a laser-based system for automated removal of differentiated cells from pluripotent stem cell cultures using light-responsive polymers and machine learning.

bioRxiv · Mar 12, 2018Bioengineering