Author

J. Toubiana

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 8

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 6 Organism:C. elegans· 4 Approach:statistical model· 4 Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1

Frequent Co-Authors

S. Brisse· 8 shared M. Hennart· 6 shared E. Badell-Ocando· 4 shared A. Carmi-Leroy· 3 shared E. Badell· 3 shared V. Passet· 3 shared A. Criscuolo· 2 shared A. Landier· 2 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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8 shared papersMicrobiology

S. Brisse

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Author profile →

8 papers

Recent·Most cited

A global Corynebacterium diphtheriae genomic framework sheds light on current diphtheria reemergence

M. Hennart, C. Crestani, S. Bridel, N. Armatys, S. Bremont, A. Carmi-Leroy, A. Landier, V. Passet, L. Fonteneau, S. Vaux, J. Toubiana, E. Badell-Ocando, S. Brisse

The paper develops a bioinformatics pipeline to analyze C. diphtheriae genomes, revealing virulence and resistance heterogeneities and emerging threats.

bioRxiv · Feb 20, 2023Microbiology

Corynebacterium of the diphtheriae complex in companion animals: clinical and microbiological characterization of 64 cases from France

K. Museux, G. Arcari, G. Rodrigo, M. Hennart, E. Badell-Ocando, J. Toubiana, S. Brisse

This paper characterizes 64 cases of Corynebacteria of the diphtheriae complex (Cdc) infections in companion animals, identifying C. ulcerans as a zoonotic risk and highlighting the need for improved detection and management.

bioRxiv · Jan 4, 2023 · PreprintMicrobiology

Genomic epidemiology of Corynebacterium diphtheriae in New Caledonia

E. Tessier, M. Hennart, E. Badell-Ocando, V. Passet, J. Toubiana, A. Biron, A.-C. Gourinat, A. Merlet, J. Colot, S. Brisse

This study analyzes C. diphtheriae isolates in New Caledonia, identifying tox-positive strains linked to travel and local transmission, while most isolates are non-toxigenic and antibiotic-susceptible.

bioRxiv · Oct 23, 2022 · PreprintMicrobiology

Genomic library of Bordetella

S. Bridel, V. Bouchez, S. Hauck, B. Brancotte, N. Armatys, A. Landier, E. Muhle, S. Guillot, J. Toubiana, M. C. Maiden, K. A. Jolley, S. Brisse

The paper creates a unified genomic library of Bordetella strains, revealing new species and phylogenetic insights, and provides resources for studying Bordetella evolution and epidemiology.

bioRxiv · Jan 20, 2022 · PreprintMicrobiology

Genomic epidemiology and strain taxonomy of Corynebacterium diphtheriae

J. Guglielmini, M. Hennart, E. Badell, J. Toubiana, A. Criscuolo, S. Brisse

This study develops a cgMLST scheme for C. diphtheriae to track outbreaks and reveals cryptic transmission chains and sublineages.

bioRxiv · Jul 18, 2021Microbiology

Population genomics and antimicrobial resistance in Corynebacterium diphtheriae

M. Hennart, L. G. Panunzi, C. Rodrigues, Q. Gaday, S. L. Baines, M. Barros-Pinkelnig, A. Carmi-Leroy, M. Dazas, A.-M. Wehenkel, X. Didelot, J. Toubiana, E. Badell, S. Brisse

This study investigates antimicrobial resistance in Corynebacterium diphtheriae by analyzing genomic and phenotypic data from 247 strains, identifying resistance mechanisms and plasmids.

Genome Medicine · Nov 27, 2020Peer-reviewedMicrobiology

Description of Corynebacterium rouxii sp. nov., a novel member of the diphtheriae species complex

E. Badell, M. Hennart, C. Rodrigues, V. Passet, M. Dazas, L. Panunzi, V. Bouchez, A. Carmi-Leroy, J. Toubiana, S. Brisse

The paper describes a new Corynebacterium species, C. rouxii, based on genomic and phenotypic analysis of six isolates previously classified as C. diphtheriae biovar Belfanti.

bioRxiv · Nov 26, 2019 · PreprintMicrobiology

Carriage of a single strain of non-toxigenic Corynebacterium diphtheriae biovar Belfanti (Corynebacterium belfantii) in four patients with cystic fibrosis

D. Pivot, A. Fanton, E. Badell-Ocando, M. Benouachkou, K. Astruc, F. Huet, L. Amoureux, C. Neuwirth, A. Criscuolo, S. Aho, J. Toubiana, S. Brisse

This study identifies a non-toxigenic C. belfantii strain persistently colonizing four CF patients and transmitted within a CF care center over six years.

bioRxiv · Jan 17, 2019Microbiology