Author

Ruifeng Huo

Nanjing University of Chinese Medicine

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:drug response / drug discovery· 1 Approach:statistical model· 1

Frequent Co-Authors

Jiangshan Shi· 1 shared Kun WangiD· 1 shared Mingyue ZhengiD· 1 shared Ning Qu· 1 shared Ruirui YangiD· 1 shared Runze ZhangiD· 1 shared Shengkun Ni· 1 shared Sulin ZhangiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Jiangshan Shi

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1 paper

Recent·Most cited

Identify compound-protein interaction with knowledge graph embedding of perturbation transcriptomics

Shengkun Ni, Xiangtai Kong, Yingying Zhang, Zhengyang Chen, Zhaokun Wang, Zunyun Fu, Ruifeng Huo, Xiaochu Tong, Ning Qu, Xiaolong Wu, Kun Wang, Wei Dong Zhang, Runze Zhang, Zimei Zhang, Jiangshan Shi, , Mingyue Zheng

PertKGE improves compound-protein interaction prediction using knowledge graph embedding of perturbation transcriptomics, outperforming baselines in cold-start settings and identifying novel therapeutic targets.

bioRxiv · Apr 8, 2024 · PreprintBioinformatics