Author

Julia Falk

Newcastle University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 3 Approach:statistical model· 3 Assay:ATAC-seq· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1

Frequent Co-Authors

David Alan YoungiD· 3 shared Kathleen CheungiD· 3 shared Matt J. BarteriD· 3 shared Louise N. ReynardiD· 2 shared Andreas PanagiotopoulosiD· 1 shared Andrew J. SkeltoniD· 1 shared Caitlin Cosimini· 1 shared Carole J. ProctoriD· 1 shared

Activity by Year

2020-2020 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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3 shared papersGenomics

David Alan YoungORCID

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3 papers

Recent·Most cited

Dynamic chromatin accessibility landscape changes following interleukin-1 stimulation

Matt J. Barter, Kathleen Cheung, Julia Falk, Andreas Panagiotopoulos, Caitlin Cosimini, Siobhan O’Brien, Karina Teja-Putri, Graham W. Neill, David John Deehan, David Alan Young

The paper identifies and functionally validates dynamically accessible chromatin regions in response to IL-1 stimulation using ATAC-seq and CRISPR/Cas9.

Epigenetics · Aug 2, 2020Peer-reviewedGenomics

Histone ChIP-Seq identifies differential enhancer usage during chondrogenesis as critical for defining cell-type specificity

Kathleen Cheung, Matt J. Barter, Julia Falk, Carole J. Proctor, Louise N. Reynard, David Alan Young

The paper uses histone ChIP-seq and DNA methylation data to identify enhancer usage changes during chondrocyte differentiation and their regulation by SOX9.

The FASEB Journal · Feb 14, 2020Peer-reviewedGenomics

DNA hypomethylation during MSC chondrogenesis occurs predominantly at enhancer regions

Matt J. Barter, Catherine Bui, Kathleen Cheung, Julia Falk, Rodolfo Gómez, Andrew J. Skelton, Hannah R. Elliott, Louise N. Reynard, David Alan Young

The paper identifies DNA hypomethylation during MSC chondrogenesis, particularly at enhancer regions, and links these changes to the chondrocyte phenotype and cartilage disease.

Scientific Reports · Jan 24, 2020Peer-reviewedGenomics