Author

K. Abudahab

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Organism:E. coli· 1 Research Focus:host-pathogen & immune response· 1 Approach:statistical model· 1

Frequent Co-Authors

J. Corander· 2 shared A. McNally· 1 shared C. Connor· 1 shared C. Horner· 1 shared D. Aanensen· 1 shared D. M. Aanensen· 1 shared J. M. Prada· 1 shared J. Parkhill· 1 shared

Activity by Year

2017-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMicrobiology

J. Corander

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2 papers

Recent·Most cited

Signatures of negative frequency dependent selection in colonisation factors and the evolution of a multi-drug resistant lineage of Escherichia coli

A. McNally, T. Kallonen, C. Connor, K. Abudahab, D. Aanensen, C. Horner, S. Peacock, J. Parkhill, N. Croucher, J. Corander

This study identifies negative frequency-dependent selection in Escherichia coli ST131 as a key driver of its evolutionary success and adaptation to different ecological niches.

bioRxiv · Nov 29, 2018 · PreprintMicrobiology

PANINI: Pangenome Neighbor Identification for Bacterial Populations

K. Abudahab, J. M. Prada, Z. Yang, S. D. Bentley, N. J. Croucher, J. Corander, D. M. Aanensen

PANINI identifies bacterial population neighbours using machine learning, integrating core and accessory genome data with metadata for epidemiological analysis.

bioRxiv · Aug 21, 2017Microbiology