Author

K. Kalantar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Approach:experimental assay· 1

Frequent Co-Authors

C. Langelier· 2 shared J. L. DeRisi· 2 shared A. Belzer· 1 shared A. Jauregui· 1 shared A. Melton· 1 shared A. Sapru· 1 shared C. C. Dvorak· 1 shared C. Calfee· 1 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersMicrobiology

C. Langelier

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Author profile →

3 papers

Recent·Most cited

Rapid metagenomic characterization of a case of imported COVID-19 in Cambodia

J. E. Manning, J. A. Bohl, S. Lay, S. Chea, S. Ly, Y. Sengdoeurn, S. Heng, C. Vuthy, K. Kalantar, V. Ahyong, M. Tan, J. Sheu, C. M. Tato, J. DeRisi, L. Baril, , E. A. Karlsson

The paper describes using metagenomic sequencing and an open-source pipeline to rapidly characterize Cambodia's first COVID-19 case.

bioRxiv · Mar 2, 2020 · PreprintMicrobiology

A Metagenomic Comparison of Tracheal Aspirate and Mini-Bronchial Alveolar Lavage for Assessment of Respiratory Microbiota

K. Kalantar, F. Moazed, S. Christenson, J. Wilson, T. Deiss, A. Belzer, K. Vessell, A. Jauregui, S. Boulourchi, J. L. DeRisi, C. Calfee, C. Langelier

This paper compares metagenomic sequencing of tracheal aspirates and mini-bronchial alveolar lavage to assess respiratory microbiota and develop diagnostic models for lower respiratory tract infections.

bioRxiv · Aug 17, 2018Microbiology

Pulmonary Metagenomic Sequencing Suggests Missed Infections in Immunocompromised Children

M. S. Zinter, C. C. Dvorak, M. Y. Mayday, K. Iwanaga, N. P. Ly, M. E. McGarry, G. D. Church, L. E. Faricy, C. M. Rowan, J. R. Hume, M. E. Steiner, E. D. Crawford, C. Langelier, K. Kalantar, E. D. Chow, , J. L. DeRisi

This study develops a metagenomic sequencing assay to detect missed pathogens in immunocompromised children, finding increased sensitivity for identifying potential pathogens in lung samples.

bioRxiv · Mar 29, 2018Microbiology