Author

K. Olsen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Cancer Biology· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Approach:deep learning· 2 Approach:statistical model· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Rubinsteyn· 2 shared C. C. Smith· 2 shared B. G. Vincent· 1 shared B. Vincent· 1 shared C. Boumendil· 1 shared C. Haber· 1 shared C. Willis· 1 shared D. S. Bortone· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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2 shared papersCancer Biology

A. Rubinsteyn

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Source-to-Tap Investigation of the Occurrence of Nontuberculous Mycobacteria in a Full-Scale Chloraminated Drinking Water System

K. S. Dowdell, S. C. Potgieter, K. Olsen, S. Lee, M. Vedrin, L. J. Caverly, J. J. LiPuma, L. Raskin

This study investigates NTM occurrence in a chloraminated drinking water system, finding higher concentrations in summer first draw samples and highlighting the role of flushing and building plumbing in NTM persistence.

bioRxiv · Apr 18, 2024Microbiology

LENS - Landscape of Effective Neoantigens Software

S. P. Vensko, K. Olsen, D. S. Bortone, C. C. Smith, S. Chai, W. Beckabir, M. Fini, O. Jadi, A. Rubinsteyn, B. Vincent

LENS identifies tumor-specific and tumor-associated antigens from diverse genomic sources in cancer samples, expanding epitope discovery beyond somatic variants.

bioRxiv · Apr 1, 2022Cancer Biology

Landscape and Selection of Vaccine Epitopes in SARS-CoV-2

C. C. Smith, S. Entwistle, C. Willis, S. Vensko, W. Beck, J. Garness, M. Sambade, E. Routh, K. Olsen, J. Kodysh, T. O'Donnell, C. Haber, K. Heiss, V. Stadler, E. Garrison, , A. Rubinsteyn

This study identifies vaccine epitopes in SARS-CoV-2 by combining computational T cell epitope prediction, B cell epitope mapping, and manufacturability criteria to propose candidate peptides for further testing.

bioRxiv · Jun 4, 2020Immunology

A role for the autophagic receptor, SQSTM1/p62, in trafficking NF-kB/RelA to nucleolar aggresomes

I. T. Lobb, P. Morin, K. J. Martin, X. Lleshi, K. Olsen, R. R. Duncan, L. A. Stark

This paper identifies a novel role for SQSTM1/p62 in trafficking NF-kB/RelA to nucleolar aggresomes under stress, which helps maintain nuclear proteostasis and could inform cancer therapies.

bioRxiv · Apr 9, 2020Cell Biology

Nuclear pore density controls heterochromatin reorganization during senescence

W. Bickmore, C. Boumendil, P. Hari, K. Olsen, J.-C. Acosta

This study shows that increased nuclear pore density during oncogene-induced senescence drives SAHF formation, which is essential for SASP expression but not cell cycle arrest.

bioRxiv · Jul 21, 2018Cell Biology