Author

K. Van den Berge

Ghent University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:mouse· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Godhe· 1 shared A. J. Alverson· 1 shared A. Kremp· 1 shared C. Li· 1 shared C. Sjoqvist· 1 shared D. De Maeyer· 1 shared Dana BakalariD· 1 shared Davide S. RissoiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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1 shared paperMicrobiology

A. Godhe

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

A Latent Activated Olfactory Stem Cell State Revealed by Single Cell Transcriptomic and Epigenomic Profiling

K. Van Den Berge, Dana Bakalar, Hsin-Jung Chou, Divya Kunda, Davide S. Risso, Kelly Street, Elizabeth A. Purdom, Sandrine Dudoit, John Ngai, Whitney E. Heavner

This study identifies a latent activated stem cell state in olfactory epithelium using single-cell transcriptomic and epigenomic profiling during injury-induced regeneration.

Stem Cell Reports · Jan 8, 2026Peer-reviewedGenomics

AAV-HBV mouse model replicates immune exhaustion patterns of chronic HBV patients at single-cell level

N. Conceicao-Neto, Q. Han, Z. Yao, W. Pierson, Q. Wu, K. Dockx, L. Aerts, D. De Maeyer, K. Van den Berge, C. Li, G. Kukolj, R. Zhu, O. Podlaha, I. Najera, E. Van Gulck

bioRxiv · Aug 7, 2023 · PreprintImmunology

Genotype-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline

E. Pinseel, T. Nakov, K. Van den Berge, K. M. Downey, K. J. Judy, O. Kourtchenko, A. Kremp, E. C. Ruck, C. Sjoqvist, M. Topel, A. Godhe, A. J. Alverson

This study shows that genotype-specific transcriptional responses are more significant than salinity effects in a marine diatom adapting to low salinity in the Baltic Sea.

bioRxiv · Nov 4, 2021 · PreprintMicrobiology