Author

Kang-Wen Cai

Peking University Cancer Hospital

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:gene regulatory network inference· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:drug response / drug discovery· 1 Assay:Hi-C· 1 Assay:scATAC-seq· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Hua‐Jun WuiD· 2 shared Rui-Xiang Gao· 2 shared Yuanchen Sun· 2 shared An Liu· 1 shared Chang Fu LuiD· 1 shared Chang LuiD· 1 shared Fangdi Xu· 1 shared Fu-Ting Lai· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersMicrobiology

Hua‐Jun WuORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintDec 4, 2025

Exploring multi-level microbial interactions from individual 3D genomes to community networks

Wen-Jie Jiang, Kang-Wen Cai, Yuanchen Sun…·Hua‐Jun Wu

This study introduces FindMeta3D to analyze microbial 3D genomes and cross-domain interactions, revealing conserved chromatin patterns and infection-related hotspots with therapeutic implications.

DOI 10.64898/2025.12.03.692222

Hi-Cdeep learning

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BioinformaticsbioRxivPreprintMay 14, 2025

Hi-Compass resolves cell-type chromatin interactions by single-cell and spatial ATAC-seq data across biological scales

Yuanchen Sun, Wenjie Jiang, Kang-Wen Cai…·Hua‐Jun Wu

Hi-Compass predicts chromatin organization from single-cell and spatial ATAC-seq data, outperforming existing methods and enabling analysis across biological scales.

DOI 10.1101/2025.05.14.654019

scATAC-seqspatial transcriptomics

𝕏 PostBluesky