Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA
Hiro Takahashi, Noriya Hayashi, Yuta Hiragori, Shun Sasaki, Taichiro Motomura, Yui Yamashita, Satoshi Naito, Anna Takahashi, Kazuyuki Fuse, Kenji Satou, Toshinori Endo, Shoko Kojima, Hitoshi Onouchi
The paper introduces a pipeline called ESUCA to identify conserved upstream ORFs (CPuORFs) across multiple plant species and finds that many of these CPuORFs are functionally conserved.
BMC Genomics · Mar 30, 2020Peer-reviewedBioinformatics