Author

Kelly Williams

HudsonAlpha Institute for Biotechnology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1 Genetics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Akansha Gupta· 1 shared Akira Iwami· 1 shared André Khayat· 1 shared Andrew A. HardiganiD· 1 shared Anna HurstiD· 1 shared Anne Dumaine· 1 shared Arnald Alonso· 1 shared Bobbi E. Johnston· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperGenetic & Genomic Medicine

Akansha Gupta

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Author profile →

4 papers

Recent·Most cited

Genetic ancestry shapes context-dependent immune regulation across Indigenous South American populations

Cecily Choy, Lucas Vicuña, Maria Patino, Daniel S. Araújo, Daisy Obispo, María L. Guevara, Susanne Fonseca, Débora Scariot, Cherly Araujo, João Ricardo Guerreiro, Óscar Acosta, Camille Johnson, Kevin Meier, Anne Dumaine, Kelly Williams, , Luis Bruno Barreiro

The paper generates a single-cell transcriptional atlas of Indigenous South American populations and shows genetic ancestry influences immune gene expression, particularly after stimulation.

medRxiv · Oct 21, 2026 · PreprintGenetic & Genomic Medicine

Method Comparison for Japanese Encephalitis Virus Detection in Samples Collected from the Indo-Pacific Region

Gary Crispell, Kelly Williams, Eric Zielinski, Akira Iwami, Zachary T Homas, Karen Thomas

The paper compares JEV detection methods in mosquito samples from South Korea, finding RT-PCR is cost-effective while Twist CVRP identifies more viral genomes.

Frontiers in Public Health · Nov 24, 2022Peer-reviewedMolecular Biology

Identifying rare, medically-relevant genetic variation in a diverse population: opportunities and pitfalls

Kevin M. Bowling, Michelle L. Thompson, David E. Gray, James M.J. Lawlor, Kelly Williams, Kelly M. East, Whitley V. Kelley, Irene Moss, Devin Absher, E. Christopher Partridge, Anna Hurst, Jeffrey C. Edberg, Gregory S. Barsh, Bruce R. Korf, Gregory M. Cooper

The paper evaluates genomic screening in Alabama, finding 51% of identified variants were false positives, with higher rates in African-Americans due to alternative alleles.

bioRxiv · May 28, 2020 · PreprintGenetics

aRNApipe: A balanced, efficient and distributed pipeline for processing RNA-seq data in high performance computing environments

Arnald Alonso, Brittany N. Lasseigne, Kelly Williams, Josh Nielsen, Ryne C. Ramaker, Andrew A. Hardigan, Bobbi E. Johnston, Brian S. Roberts, Sara J. Cooper, Sara Marsal, R Myers

aRNApipe is a modular RNA-seq processing pipeline designed for HPC environments, offering efficient workflow management and customizable analysis modules.

Bioinformatics · Jan 20, 2017Peer-reviewedBioinformatics