Author

Kristin E. Murphy

University of Rochester Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Organism:mouse· 3 Assay:ChIP-seq· 2 Research Focus:gene regulatory network inference· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Organism:zebrafish· 1

Frequent Co-Authors

Patrick J. MurphyiD· 3 shared Claire E. Makowski· 2 shared Fanju W. MengiD· 2 shared Brandon J Park· 1 shared Deanna Abid· 1 shared Eric Cefaloni· 1 shared Karli D Casler· 1 shared Laurie A. SteineriD· 1 shared

Activity by Year

2020-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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3 shared papersGenomics

Patrick J. MurphyORCID

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Author profile →

4 papers

Recent·Most cited

The Condensin II Complex Regulates the Expression of Essential Gene Expression Programs During Erythropoiesis

Deanna Abid, Kristin E. Murphy, Zachary C. Murphy, Nabil F. Rahman, Michael R. Getman, Laurie A. Steiner

This study shows that Condensin II regulates cell cycle progression and erythroid differentiation but is not required for nuclear condensation during erythropoiesis.

Development · Apr 22, 2025Peer-reviewedGenomics

CUT&Tag Identifies Repetitive Genomic Loci that are Excluded from ChIP Assays

Brandon J Park, Shan Hua, Karli D Casler, Eric Cefaloni, Michael C. Ayers, Rahiim F Lake, Kristin E. Murphy, Paula M. Vertino, Mitchell R. O’Connell, Patrick J. Murphy

The paper compares ChIP-Seq and CUT&Tag for chromatin modification detection, finding CUT&Tag better captures repetitive elements and heterochromatin regions.

bioRxiv · Feb 3, 2025 · PreprintGenomics

Competition for H2A.Z between genes and repetitive elements establishes response to anti-viral immune activation

Fanju W. Meng, Kristin E. Murphy, Claire E. Makowski, Patrick J. Murphy

The paper shows that H2A.Z levels influence sensitivity to retroviral activation by shifting its distribution between gene promoters and repetitive elements in zebrafish embryos.

bioRxiv · Mar 31, 2022 · PreprintGenomics

Genome-wide Chromatin Accessibility is Restricted by ANP32E

Kristin E. Murphy, Fanju W. Meng, Claire E. Makowski, Patrick J. Murphy

The paper shows ANP32E restricts genome-wide chromatin accessibility by regulating H2A.Z localization in mouse fibroblasts.

Nature Communications · Oct 8, 2020Peer-reviewedGenetics