Author

Lujing Zhang

Carnegie Mellon University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:proteomics· 1 Approach:simulation· 1

Frequent Co-Authors

Bernie DevliniD· 2 shared Kathryn RoederiD· 2 shared Matthew L. MacDonaldiD· 2 shared Andrew G. DeMarcoiD· 1 shared Chiara AuwerxiD· 1 shared F. Kyle SatterstromiD· 1 shared Jack M. FuiD· 1 shared Joseph D. BuxbaumiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersGenomics

Bernie DevlinORCID

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Author profile →

2 papers

Recent·Most cited

Autism genes converge on three functional programs organized by neuronal subclass, developmental timing, and cortical patterning

Rachel L. Smith, Yundan Liao, Lambertus Klei, Lujing Zhang, Yunlong Ma, Miao Tang, F. Kyle Satterstrom, Chiara Auwerx, Jack M. Fu, Joseph D. Buxbaum, Mark J. Daly, Michael E. Talkowski, Luis de la Torre-Ubieta, Yevgenia Kozorovitskiy, Matthew L. MacDonald, , Michael J. Gandal

This study identifies three functional programs impacted by autism genes, contextualized across neuronal subclasses, developmental timing, and cortical regions.

bioRxiv · Sep 24, 2026 · PreprintGenomics

Inferring disruption of directed graphs using LIKA reveals altered protein phosphorylation networks in schizophrenia

Lujing Zhang, Andrew G. DeMarco, Kimia Ghafari, Bernie Devlin, Matthew L. MacDonald, Kathryn Roeder

LIKA, a likelihood model over many-to-many kinase-substrate networks, beats KSEA in simulations with shared substrates, recovers EGFR and ABL1 in cell lines, and ranks MAPK3 first in schizophrenia cortex.

bioRxiv · Aug 7, 2026 · PreprintBioinformatics✦ In-depth digest