Author

M. J. Martin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 6 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 5 Approach:statistical model· 4 Approach:experimental assay· 3 Organism:human· 3 Research Focus:variant calling· 3 Organism:bacteria (other)· 2 Research Focus:cell type annotation· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

F. Lebreton· 5 shared B. W. Corey· 3 shared J. W. Bennett· 3 shared B. T. Jones· 2 shared J. Stam· 2 shared K. F. Lane· 2 shared K. Schaufler· 2 shared L. R. Hall· 2 shared

Activity by Year

2020-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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5 shared papersMicrobiology

F. Lebreton

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Detecting, mapping, and suppressing the spread of a decade-long Pseudomonas aeruginosa nosocomial outbreak with genomics

W. Stribling, L. R. Hall, A. Powell, C. Harless, M. J. Martin, B. W. Corey, E. Snesrud, A. Ong, R. Maybank, J. Stam, K. Bartlett, B. T. Jones, L. N. Preston, K. F. Lane, B. Thompson, , F. Lebreton

This study uses genomics to trace a long-term Pseudomonas aeruginosa hospital outbreak, identifies transmission routes, and shows how infection control measures reduced spread.

bioRxiv · Jul 24, 2023 · PreprintMicrobiology

Differentiation of hypervirulent and classical Klebsiella pneumoniae with acquired drug resistance

T. A. Russo, C. L. Alvarado, C. J. Davies, Z. J. Drayer, U. Carlino-MacDonald, A. Hutson, T. L. Luo, M. J. Martin, B. W. Corey, K. A. Moser, J. K. Rasheed, A. L. Halpin, P. McGann, F. Lebreton

This study identifies biomarker combinations to differentiate hypervirulent from classical Klebsiella pneumoniae strains with acquired resistance using logistic regression and a CART model.

bioRxiv · Jun 30, 2023 · PreprintMicrobiology

Global diversity of enterococci and description of 18 novel species

J. A. Schwartzman, F. Lebreton, R. Salamzade, M. J. Martin, K. Schaufler, A. Urhan, T. Abeel, I. L. B. C. Camargo, B. F. Sgardioli, J. Prichula, A. P. G. Frazzon, D. Van Tyne, G. Treinish, C. J. Innis, J. A. Wagenaar, , M. S. Gilmore

This study identifies 18 new enterococcal species from global samples, revealing host associations and genetic diversity within the genus.

bioRxiv · May 18, 2023 · PreprintMicrobiology

A Panel of Diverse Klebsiella pneumoniae Clinical Isolates for Research and Development

M. J. Martin, W. C. Stribling, A. C. Ong, R. A. Maybank, Y. I. Kwak, J. A. Rosado-Mendez, L. Preston, K. F. Lane, M. Julius, A. R. Jones, M. K. Hinkle, P. E. Waterman, E. Lesho, F. Lebreton, J. W. Bennett, P. McGann

The paper describes a panel of 100 diverse Klebsiella pneumoniae isolates selected from 3,878 clinical isolates to support research on antimicrobial resistance and pathogenesis.

bioRxiv · Aug 17, 2022Microbiology

Antimicrobial resistance and virulence characteristics of Klebsiella pneumoniae isolates in Kenya

A. W. Muraya, C. Kyany'a, S. Kiyaga, H. J. Smith, C. Kibet, M. J. Martin, J. Kimani, L. Musila

This study analyzes antibiotic resistance and virulence genes in Kenyan K. pneumoniae isolates, revealing multidrug resistance and high-risk clones with potential for outbreaks.

bioRxiv · Feb 1, 2022 · PreprintMicrobiology

Anatomy of an Extensively Drug Resistant Klebsiella pneumoniae Outbreak in Tuscany, Italy

M. J. Martin, B. W. Corey, F. Sannio, L. R. Hall, U. MacDonald, B. T. Jones, E. G. Mills, J. Stam, R. Maybank, Y. Kwak, K. Schaufler, K. Becker, N. O. Hubner, S. Cresti, G. Tordini, , J.-D. Docquier

This study tracks an NDM-producing K. pneumoniae outbreak in Italy, identifying a high-risk clone with multidrug resistance and a hybrid plasmid linked to hypervirulence.

bioRxiv · Jun 2, 2021Microbiology

Ancient BED-domain-containing immune receptor from wild barley confers widely effective resistance to leaf rust

C. Chen, B. Clark, M. J. Martin, O. N. Matny, B. J. Steffenson, J. D. Franckowiak, M. Mascher, D. Singh, D. Perovic, T. Richardson, S. Periyannan, E. S. Lagudah, R. Park, P. M. Dracatos

The paper identifies Rph15, a resistance gene from wild barley, which provides broad-spectrum resistance to leaf rust and develops a diagnostic marker for its introgression into cultivated barley.

bioRxiv · Jan 19, 2020 · PreprintPlant Biology