Author

F. Lebreton

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 7

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Assay:whole-genome sequencing· 4 Approach:experimental assay· 3 Organism:human· 3 Organism:bacteria (other)· 2 Research Focus:database / resource· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

M. J. Martin· 5 shared J. W. Bennett· 4 shared B. W. Corey· 3 shared J. Stam· 3 shared P. McGann· 3 shared Y. I. Kwak· 3 shared A. C. Ong· 2 shared A. R. Jones· 2 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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5 shared papersMicrobiology

M. J. Martin

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Author profile →

7 papers

Recent·Most cited

Detecting, mapping, and suppressing the spread of a decade-long Pseudomonas aeruginosa nosocomial outbreak with genomics

W. Stribling, L. R. Hall, A. Powell, C. Harless, M. J. Martin, B. W. Corey, E. Snesrud, A. Ong, R. Maybank, J. Stam, K. Bartlett, B. T. Jones, L. N. Preston, K. F. Lane, B. Thompson, , F. Lebreton

This study uses genomics to trace a long-term Pseudomonas aeruginosa hospital outbreak, identifies transmission routes, and shows how infection control measures reduced spread.

bioRxiv · Jul 24, 2023 · PreprintMicrobiology

Differentiation of hypervirulent and classical Klebsiella pneumoniae with acquired drug resistance

T. A. Russo, C. L. Alvarado, C. J. Davies, Z. J. Drayer, U. Carlino-MacDonald, A. Hutson, T. L. Luo, M. J. Martin, B. W. Corey, K. A. Moser, J. K. Rasheed, A. L. Halpin, P. McGann, F. Lebreton

This study identifies biomarker combinations to differentiate hypervirulent from classical Klebsiella pneumoniae strains with acquired resistance using logistic regression and a CART model.

bioRxiv · Jun 30, 2023 · PreprintMicrobiology

Global diversity of enterococci and description of 18 novel species

J. A. Schwartzman, F. Lebreton, R. Salamzade, M. J. Martin, K. Schaufler, A. Urhan, T. Abeel, I. L. B. C. Camargo, B. F. Sgardioli, J. Prichula, A. P. G. Frazzon, D. Van Tyne, G. Treinish, C. J. Innis, J. A. Wagenaar, , M. S. Gilmore

This study identifies 18 new enterococcal species from global samples, revealing host associations and genetic diversity within the genus.

bioRxiv · May 18, 2023 · PreprintMicrobiology

A high-throughput sequencing approach identifies immunotherapeutic targets for bacterial meningitis in neonates

S. Pons, E. Frapy, Y. Sereme, C. Gaultier, F. Lebreton, A. Kropec, O. Danilchanka, L. Schlemmer, C. Schrimpf, M. Allain, F. Angoulvant, H. Lecuyer, S. Bonacorsi, H. Aschard, H. Sokol, , D. Skurnik

This study uses TnSeq to identify E. coli K1 genes important for meningitis, focusing on PNAG as a vaccine target, showing its efficacy against E. coli and Group B Streptococcus in neonatal models.

bioRxiv · Dec 22, 2022Microbiology

A Panel of Diverse Klebsiella pneumoniae Clinical Isolates for Research and Development

M. J. Martin, W. C. Stribling, A. C. Ong, R. A. Maybank, Y. I. Kwak, J. A. Rosado-Mendez, L. Preston, K. F. Lane, M. Julius, A. R. Jones, M. K. Hinkle, P. E. Waterman, E. Lesho, F. Lebreton, J. W. Bennett, P. McGann

The paper describes a panel of 100 diverse Klebsiella pneumoniae isolates selected from 3,878 clinical isolates to support research on antimicrobial resistance and pathogenesis.

bioRxiv · Aug 17, 2022Microbiology

Anatomy of an Extensively Drug Resistant Klebsiella pneumoniae Outbreak in Tuscany, Italy

M. J. Martin, B. W. Corey, F. Sannio, L. R. Hall, U. MacDonald, B. T. Jones, E. G. Mills, J. Stam, R. Maybank, Y. Kwak, K. Schaufler, K. Becker, N. O. Hubner, S. Cresti, G. Tordini, , J.-D. Docquier

This study tracks an NDM-producing K. pneumoniae outbreak in Italy, identifying a high-risk clone with multidrug resistance and a hybrid plasmid linked to hypervirulence.

bioRxiv · Jun 2, 2021Microbiology

A Panel of Diverse Pseudomonas aeruginosa Clinical Isolates for Research and Development

F. Lebreton, E. Snesrud, L. Hall, E. G. Mills, M. R. Galac, J. Stam, A. C. Ong, R. A. Maybank, Y. I. Kwak, S. Johnson, M. Julius, B. E. Swierczewski, P. E. Waterman, M. K. Hinkle, A. R. Jones, , P. McGann

The paper describes a panel of 100 diverse Pseudomonas aeruginosa clinical isolates selected to represent genetic and antibiotic susceptibility diversity for research and development.

bioRxiv · Apr 23, 2021Microbiology