Author

Mabel Budia-Silva

University of Freiburg

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Hajo GrundmanniD· 2 shared Sandra ReuteriD· 2 shared Allison McGeeriD· 1 shared Amanda CarrolliD· 1 shared Ana BudimiriD· 1 shared Daria FrolovaiD· 1 shared Derek R. MacFaddeniD· 1 shared Gian María RossoliniiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersGenomics

Hajo GrundmannORCID

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2 papers

Recent·Most cited

Neighbour Typing Using Long Read Sequencing Provides Rapid Prediction of Sequence Type and Antimicrobial Susceptibility of Klebsiella pneumoniae

Mabel Budia-Silva, Amanda Carroll, Hiren Ghosh, Allison McGeer, Tommaso Giani, Gian María Rossolini, Karel Břinda, William Paul Hanage, Hajo Grundmann, Derek R. MacFadden, Sandra Reuter

This paper evaluates RASE, a neighbor typing method using long-read sequencing, for predicting sequence types and antimicrobial susceptibility of Klebsiella pneumoniae in real time.

bioRxiv · Sep 3, 2025 · PreprintGenomics

TRACKING CLONAL AND PLASMID TRANSMISSION IN COLISTIN AND CARBAPENEM RESISTANT KLEBSIELLA PNEUMONIAE

Ifeoluwa J. Akintayo, Marko Siroglavić, Daria Frolova, Mabel Budia-Silva, Hajo Grundmann, Zamin Iqbal, Ana Budimir, Sandra Reuter

This study tracks clonal and plasmid transmission in colistin- and carbapenem-resistant K. pneumoniae using short and long read sequencing, revealing complex plasmid networks and highlighting the need for full-length sequencing to understand resistance spread.

mSystems · Jan 10, 2025Peer-reviewedMicrobiology