Author

Madison Rzepka

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:perturbation response prediction· 1 Research Focus:phylogenetics / evolution· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Amber Paasch· 2 shared Ivan García-BassetsiD· 2 shared Likun YaoiD· 2 shared Long Pham· 2 shared Ming LeiiD· 2 shared Peter L. ChangiD· 2 shared Tetsuya Kawamura· 2 shared Veronika MikhaylovaiD· 2 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersMolecular Biology

Amber Paasch

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2 papers

Recent·Most cited

Single-Molecule Barcoding Technology for Single-Cell Genomics

Ivan García-Bassets, Guoya Mo, Yu Xia, Tsai-Chin Wu, Immanuel Mekuria, Veronika Mikhaylova, Madison Rzepka, Tetsuya Kawamura, Peter L. Chang, Amber Paasch, Long Pham, Surya Shiv Venugopal, Sandra Patricia Sanchez, Janaína Sena de Souza, Likun Yao, , Zhoutao Chen

The paper introduces AmpliDrop, a single-cell genomics barcoding technology that simplifies reagent production and workflow, enabling scalable and flexible experiments.

bioRxiv · Aug 13, 2024 · PreprintMolecular Biology

Targeted Phasing of 2-200 Kilobase DNA Fragments with a Short-Read Sequencer and a Single-Tube Linked-Read Library Method

Veronika Mikhaylova, Madison Rzepka, Tetsuya Kawamura, Yu Xia, Peter L. Chang, Shiguo Zhou, Amber Paasch, Long Pham, Naisarg Modi, Likun Yao, Adrian Pérez-Agustín, Sara Pagans, T. Christian Boles, Ming Lei, Yong Wang, , Zhoutao Chen

This paper introduces an optimized TELL-Seq protocol for cost-effective phasing of targeted genomic loci using short-read sequencing.

Scientific Reports · Apr 5, 2024Peer-reviewedGenomics