Zhoutao Chen

SpLitteR: Diploid genome assembly using linked TELL-Seq reads and assembly graphs

SpLitteR improves diploid genome assembly using linked TELL-Seq reads and assembly graphs, achieving higher contiguity without additional misassemblies.

Single-Molecule Barcoding Technology for Single-Cell Genomics

The paper introduces AmpliDrop, a single-cell genomics barcoding technology that simplifies reagent production and workflow, enabling scalable and flexible experiments.

Targeted Phasing of 2-200 Kilobase DNA Fragments with a Short-Read Sequencer and a Single-Tube Linked-Read Library Method

This paper introduces an optimized TELL-Seq protocol for cost-effective phasing of targeted genomic loci using short-read sequencing.

Ultra-low input single tube linked-read library method enables short-read NGS systems to generate highly accurate and economical long-range sequencing information for de novo genome assembly and haplotype phasing

The paper introduces a low-cost, high-accuracy method for generating long-range sequencing data using short-read NGS systems, enabling de novo genome assembly and haplotype phasing with minimal DNA input.