Author

Mami Kishima

RIKEN

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Aiko Shojima· 1 shared Charles PlessyiD· 1 shared Divya Mundackal SivaramaniD· 1 shared Erina FuruhataiD· 1 shared Filip RoudnickyiD· 1 shared Hajime Nishimura· 1 shared Harukazu SuzukiiD· 1 shared Jay W. ShiniD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenomics

Aiko Shojima

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2 papers

Recent·Most cited

Master Transcription Factors Regulate the DNA Methylation Landscape During Hepatocyte Differentiation

Takahiro Suzuki, Erina Furuhata, Shiori Maeda, Mami Kishima, Yurina Miyajima, Yuki Tanaka, Joanne Lim, Hajime Nishimura, Yuri Nakanish, Aiko Shojima, Harukazu Suzuki

The paper identifies transcription factors that regulate DNA methylation dynamics during hepatocyte differentiation, revealing GATA6's role in DNA demethylation and chromatin activation.

bioRxiv · Dec 16, 2020 · PreprintGenomics

Decoding neuronal diversity by single-cell Convert-seq

Joachim Luginbühl, Tsukasa Kouno, Rei Nakano, Thomas Edward Chater, Divya Mundackal Sivaraman, Mami Kishima, Filip Roudnicky, Piero Carninci, Charles Plessy, Jay W. Shin

This study introduces Convert-seq, a method combining scRNA-seq and ectopic gene expression to identify gene regulatory networks during cell reprogramming.

bioRxiv · Apr 5, 2019 · PreprintNeuroscience