Author

Yuki Tanaka

NEC (Japan)ORCID 0000-0001-9822-9804Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Aiko Shojima· 1 shared Alexandru OdainiciD· 1 shared Brandon MaloneiD· 1 shared Erina FuruhataiD· 1 shared Hajime Nishimura· 1 shared Harukazu SuzukiiD· 1 shared Hassen KarediD· 1 shared Ingrid Marie EgneriD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenomics

Aiko Shojima

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Machine Learning-Driven Antigen Selection Reveals Conserved T-Cell Targets for Broad Coronavirus Vaccination

Lorenzo Federico, Alexandru Odainic, Katrine Persgård Lund, Ingrid Marie Egner, Katrin E. Wiese, Lisette A. H. M. Cornelissen, Hassen Kared, Richard Stratford, Sebastian Kapell, Brandon Malone, Marius Gheorghe, Pierre Machart, Raman Siarheyeu, Yuki Tanaka, Trevor Clancy, , Ludvig A. Munthe

This study identifies conserved T-cell targets across betacoronaviruses using machine learning and validates their immunogenicity through functional assays and mRNA vaccination in mice.

bioRxiv · Apr 3, 2026 · PreprintImmunology

Master Transcription Factors Regulate the DNA Methylation Landscape During Hepatocyte Differentiation

Takahiro Suzuki, Erina Furuhata, Shiori Maeda, Mami Kishima, Yurina Miyajima, Yuki Tanaka, Joanne Lim, Hajime Nishimura, Yuri Nakanish, Aiko Shojima, Harukazu Suzuki

The paper identifies transcription factors that regulate DNA methylation dynamics during hepatocyte differentiation, revealing GATA6's role in DNA demethylation and chromatin activation.

bioRxiv · Dec 16, 2020 · PreprintGenomics