Author

Marie Peras

Second Genome (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:metabolomics· 1

Frequent Co-Authors

Brianna ChrismaniD· 1 shared Christine A. TataruiD· 1 shared Dennis Paul WalliD· 1 shared Erica M. RutherfordiD· 1 shared Jed A. FuhrmaniD· 1 shared JL WeissmaniD· 1 shared Kaiti Dunlap· 1 shared Maude M. DavidiD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Brianna ChrismanORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Topic modeling for multi-omic integration in the human gut microbiome and implications for autism

Christine A. Tataru, Marie Peras, Erica M. Rutherford, Kaiti Dunlap, Xiaochen Yin, Brianna Chrisman, Todd Z. DeSantis, Dennis Paul Wall, Shoko Iwai, Maude M. David

This study uses topic modeling to integrate multi-omic data from the gut microbiome of children with and without autism, identifying microbial processes associated with autism.

Scientific Reports · Jul 13, 2023Peer-reviewedBioinformatics

Benchmarking community-wide estimates of growth potential from metagenomes using codon usage statistics

JL Weissman, Marie Peras, Tyler P. Barnum, Jed A. Fuhrman

The paper benchmarks an improved metagenomic growth rate predictor, showing better performance on mixed-species communities and providing guidelines for data preprocessing.

mSystems · Oct 3, 2022Peer-reviewedBioinformatics