h5adify: neuro-symbolic metadata harmonizationenables scalable AnnData integration with locallarge language models
Lucas Rincón de la Rosa, Abdelmalek Mouazer, Masoud NAVIDI, Edgar Degroodt, Tamara Künzle, Sylvain Geny, Ahmed Idbaïh, Maïté Verrault, Karim Labrèche, Isaias Hernández-Verdín, Agustí Alentorn
h5adify harmonizes metadata from single-cell datasets using neuro-symbolic methods and local LLMs, improving integration and reducing batch effects.
bioRxiv · Mar 3, 2026 · PreprintBioinformatics