Predictive Modeling of Pseudomonas syringae Virulence on Bean using Gradient Boosted Decision Trees
Renan N. D. Almeida, Michael Greenberg, Cedoljub Bundalovic-Torma, Alexandre Martel, Pauline W. Wang, Maggie A. Middleton, Syama Chatterton, Darrell Desveaux, David S. Guttman
This paper uses gradient boosted decision trees to predict virulence of Pseudomonas syringae isolates on bean using genomic data, finding that PG3 strains are more host-specific than PG2 strains.
PLoS Pathogens · Jul 25, 2022Peer-reviewedGenomics