Author

O. Lespinet

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:DNA methylation· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:yeast· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

A. Lopes· 2 shared C. Papadopoulos· 2 shared O. Namy· 2 shared A. Thibessard· 1 shared B. Aigle· 1 shared C. Drevet· 1 shared C. Ducos· 1 shared C. Majorel· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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2 shared papersEvolutionary Biology

A. Lopes

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Author profile →

4 papers

Recent·Most cited

The Ribosome Profiling landscape of yeast reveals a high diversity in pervasive translation

C. Papadopoulos, H. Arbes, N. Chevrollier, S. Blanchet, D. Cornu, P. Roginski, C. Rabier, S. Atia, O. Lespinet, O. Namy, A. Lopes

The paper analyzes Ribosome Profiling data in yeast to show noncoding regions exhibit diverse translation signals, including non-canonical ones, and that translation of noncoding ORFs is determined by start codon and codon distribution.

bioRxiv · Mar 16, 2023Evolutionary Biology

Detection of orthologous genes with expression shifts linked to nickel hyperaccumulation across Eudicots

M. Gallopin, C. Drevet, V. S. Garcia de la Torre, S. Jelassi, M. Michel, C. Ducos, C. Saule, C. Majorel, V. Burtet-Sarramegna, Y. Pillon, P. Bastide, O. Lespinet, S. MERLOT

The paper identifies 31 orthologous gene groups with expression shifts linked to nickel hyperaccumulation across Eudicots using transcriptomic and phylogenetic analyses.

bioRxiv · Sep 28, 2022 · PreprintPlant Biology

Intergenic ORFs as elementary structural modules of de novo gene birth and protein evolution

C. Papadopoulos, I. Callebaut, J.-C. Gelly, I. Hatin, O. Namy, M. Renard, O. Lespinet, A. Lopes

This study explores how noncoding sequences in yeast can generate structural protein diversity and contribute to de novo gene birth.

bioRxiv · Apr 13, 2021Evolutionary Biology

Dynamics of the compartmentalized Streptomyces chromosome during metabolic differentiation

V. Lioy, J.-N. Lorenzi, S. Najah, T. Poinsignon, H. Leh, C. Saulnier, B. Aigle, S. Lautru, A. Thibessard, O. Lespinet, P. Leblond, Y. Jaszczyszyn, K. Gorrichon, N. Varoquaux, I. Junier, , S. G. Bury-Mone

This study investigates how the compartmentalized chromosome of Streptomyces changes during metabolic differentiation, revealing structural and transcriptional dynamics linked to gene expression and genome evolution.

bioRxiv · Dec 9, 2020Microbiology