Author

O. Wolkenhauer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Evolutionary Biology· 1 Immunology· 1 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 2 Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1

Frequent Co-Authors

S. Gupta· 2 shared A. Azzi· 1 shared A. Dräger· 1 shared A. Garny· 1 shared A. Sala· 1 shared A. Salehzadeh-Yazdi· 1 shared A. Tripathi· 1 shared A. Wipat· 1 shared

Activity by Year

2018-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersCancer Biology

S. Gupta

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Author profile →

4 papers

Recent·Most cited

Somatic mutations in CTCF zinc fingers produce cellular phenotypes explained by structure-function relationships

J. E. Rasko, C. G. Bailey, S. Gupta, C. Metierre, P. Amarasekera, P. O'Young, W. Kyaw, T. Laletin, H. Francis, C. Semaan, K. Singh, C. Mullighan, O. Wolkenhauer, U. Schmitz

This study identifies somatic CTCF mutations in cancer and shows how their structure-function relationships affect cellular phenotypes and tumour suppressor function.

bioRxiv · Jan 8, 2021Cancer Biology

Omics integration analyses reveal the early evolution of malignancy in breast cancer

S. Sarhadi, A. Salehzadeh-Yazdi, M. Damaghi, N. Zarghami, O. Wolkenhauer, H. Hosseini

This study integrates omics data from breast cancer to show that malignancy evolves through genetic fine-tuning rather than de novo pathways in both pre-invasive and invasive stages.

bioRxiv · Apr 9, 2020Evolutionary Biology

The Atlas of Inflammation-Resolution (AIR)

C. N. Serhan, S. Gupta, M. Perretti, C. Godson, E. Brennan, Y. Li, O. Soehnlein, T. Shimizu, O. Werz, V. Chiurchiu, A. Azzi, M. Dubourdeau, S. Smita, M. Hoch, P. Schopohl, , O. Wolkenhauer

The AIR Atlas provides a web-based resource for exploring inflammation and resolution processes, enabling bioinformatics analyses and systems biology approaches through integrated molecular interaction maps.

bioRxiv · Jan 27, 2020Immunology

Harmonizing semantic annotations for computational models in biology

M. L. Neal, M. König, D. Nickerson, G. Mısırlı, R. Kalbasi, A. Dräger, K. Atalag, V. Chelliah, M. Cooling, D. L. Cook, S. Crook, M. de Alba, S. H. Friedman, A. Garny, J. H. Gennari, , D. Waltemath

The paper analyzes semantic annotation practices in the COMBINE community and proposes recommendations for a consensus protocol to improve interoperability of computational models in biology.

bioRxiv · Jan 23, 2018Scientific Communication & Education