Author

Olukemi O. Ifeonu

University of Maryland, Baltimore

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:genome assembly· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Claudia DaubenbergeriD· 2 shared Hanzel T. Gotia· 2 shared James B. MunroiD· 2 shared Joana Caldeira Fernandes da SilvaiD· 2 shared Joshua OrvisiD· 2 shared Kyle TretinaiD· 2 shared Nicholas C. PalmateeriD· 2 shared Richard P. BishopiD· 2 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Claudia DaubenbergerORCID

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Author profile →

3 papers

Recent·Most cited

Making Common Fund data more Findable: Catalyzing a Data Ecosystem

Amanda L. Charbonneau, Arthur Brady, Karl Czajkowski, Jain Aluvathingal, Saranya Canchi, Robert Carter, Kyle Chard, Daniel J. B. Clarke, Jonathan Crabtree, Heather H. Creasy, Mike D’Arcy, Victor Felix, Michelle Gwinn Giglio, Alicia A. Gingrich, Rayna M Harris, , Owen R. White

The paper describes the development of a metadata federation system for NIH Common Fund data to improve discoverability without data movement.

GigaScience · Jan 1, 2022Peer-reviewedBioinformatics

Capture-based enrichment of Theileria parva DNA enables full genome assembly of first buffalo- derived strain and reveals exceptional intra-specific genetic diversity

Nicholas C. Palmateer, Kyle Tretina, Joshua Orvis, Olukemi O. Ifeonu, Jonathan Crabtree, Elliott Franco Drábek, Roger Pellé, Elias Awino, Hanzel T. Gotia, James B. Munro, Luke J. Tallon, W. Ivan Morrison, Claudia Daubenberger, Vishvanath M. Nene, Donald P. Knowles, , Joana Caldeira Fernandes da Silva

The paper develops a capture-based DNA enrichment method to assemble the first buffalo-derived T. parva genome, revealing high genetic diversity between cattle- and buffalo-associated strains.

PLoS neglected tropical diseases · Oct 29, 2020Peer-reviewedGenomics

Re-annotation of the Theileria parva genome refines 53% of the proteome and uncovers essential components of N-glycosylation, a conserved pathway in many organisms

Kyle Tretina, Roger Pellé, Joshua Orvis, Hanzel T. Gotia, Olukemi O. Ifeonu, Priti Kumari, Nicholas C. Palmateer, Shaikh B. Iqbal, Lindsay M. Fry, Vishvanath M. Nene, Claudia Daubenberger, Richard P. Bishop, Joana Caldeira Fernandes da Silva

The paper re-annotates the Theileria parva genome, refining 53% of the proteome and uncovering a minimal N-glycosylation pathway.

BMC Genomics · Apr 3, 2020Peer-reviewedGenomics