Author

P. Bankhead

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Pathology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 3 Research Focus:cell type annotation· 2 Assay:imaging· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

H. G. Coleman· 2 shared M. B. Loughrey· 2 shared P. D. Dunne· 2 shared A. Gilmore· 1 shared A. M. McCorry· 1 shared A. Srisuwananukorn· 1 shared A. T. Pearson· 1 shared C. Holohan· 1 shared

Activity by Year

2017-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersPathology

H. G. Coleman

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Author profile →

3 papers

Recent·Most cited

Development of a semi-automated method for tumor budding assessment in colorectal cancer and comparison with manual methods

N. C. Fisher, M. B. Loughrey, H. G. Coleman, M. D. Gelbard, P. Bankhead, P. D. Dunne

This study develops a semi-automated method for tumor budding assessment in colorectal cancer and compares it with manual methods, finding strong correlation and higher detection rates with the new approach.

bioRxiv · Jun 17, 2021Pathology

Deep learning detects virus presence in cancer histology

J. N. Kather, J. Schulte, H. I. Grabsch, C. Loeffler, H. S. Muti, J. Dolezal, A. Srisuwananukorn, N. Agrawal, S. Kochanny, S. von Stillfried, P. Boor, T. Yoshikawa, D. Jaeger, C. Trautwein, P. Bankhead, , A. T. Pearson

This paper uses deep learning to detect the presence of HPV and EBV in cancer histology images, achieving high accuracy in predicting virus-associated tumors.

bioRxiv · Jul 5, 2019 · PreprintCancer Biology

Bcl-xL as a poor prognostic biomarker and predictor of response to adjuvant chemotherapy specifically in BRAF-mutant stage II and III colon cancer

P. D. Dunne, H. G. Coleman, P. Bankhead, M. Alderdice, R. T. Gray, S. McQuaid, V. Bingham, M. B. Loughrey, J. A. James, A. M. McCorry, A. Gilmore, C. Holohan, D. Klingbiel, S. Tejpar, P. G. Johnston, , M. Lawler

The paper identifies Bcl-xL as a prognostic biomarker and predictor of response to adjuvant chemotherapy in BRAF-mutant stage II/III colon cancer using gene expression and immunohistochemistry validation.

bioRxiv · Oct 23, 2017Cancer Biology