Author

P. Donoghue

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3 Paleontology· 1 Zoology· 1

Signature Assays, Organisms & Methods

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Research Focus:phylogenetics / evolution· 4 Organism:bacteria (other)· 2 Approach:statistical model· 2 Approach:comparative / phylogenetic analysis· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1

Frequent Co-Authors

D. Pisani· 3 shared D. Schrempf· 3 shared T. A. Williams· 3 shared A. A. Davin· 2 shared A. Spang· 2 shared E. R. R. Moody· 2 shared G. J. Szöllosi· 2 shared L. L. Szantho· 2 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersEvolutionary Biology

D. Pisani

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

ATP synthase evolution on a cross-braced dated tree of life

T. A. Mahendrarajah, E. R. R. Moody, D. Schrempf, L. L. Szantho, N. Dombrowski, A. A. Davin, D. Pisani, P. Donoghue, G. J. Szollosi, T. A. Williams, A. Spang

This study reconstructs the evolutionary history of ATP synthase using a cross-braced dated tree of life, showing early divergence of F- and A/V-type lineages and timing of eukaryogenesis.

Nature Communications · Nov 17, 2023Peer-reviewedEvolutionary Biology

The three-dimensionally articulated oral apparatus of a Devonian heterostracan sheds light on feeding in Palaeozoic jawless fishes

R. P. Dearden, A. Jones, S. Giles, A. Lanzetti, M. Grohganz, Z. Johanson, S. Lautenschlager, E. Randle, P. Donoghue, I. J. Sansom

This paper describes the feeding apparatus of a Devonian heterostracan, showing it was adapted for suspension/deposit feeding rather than active predation.

bioRxiv · Aug 22, 2023Paleontology

An evolutionary timescale for Bacteria calibrated using the Great Oxidation Event

A. A. Davin, B. J. Woodcroft, R. M. Soo, R. Murali, D. Schrempf, J. Clark, B. Boussau, E. R. R. Moody, L. L. Szantho, E. Richy, D. Pisani, J. Hemp, W. W. Fischer, P. Donoghue, A. Spang, , G. J. Szöllosi

This paper uses machine learning and phylogenetic reconciliation to estimate the evolutionary timeline of Bacteria, linking transitions to aerobic lifestyles to the Great Oxidation Event.

bioRxiv · Aug 8, 2023 · PreprintEvolutionary Biology

Divergent evolutionary trajectories of bryophytes and tracheophytes from a complex common ancestor of land plants

B. J. Harris, J. W. Clark, D. Schrempf, G. J. Szöllosi, P. Donoghue, A. M. Hetherington, T. A. Williams

This study investigates the evolutionary divergence between bryophytes and tracheophytes, finding they split from a common ancestor during the Cambrian and underwent distinct genomic changes.

bioRxiv · Oct 28, 2021Evolutionary Biology

Compositional phylogenomic modelling resolves the 'Zoraptera problem': Zoraptera are sister to all other polyneopteran insects

E. Tihelka, M. S. Engel, J. Lozano-Fernandez, M. Giacomelli, Z. Yin, O. Rota-Stabelli, D. Huang, D. Pisani, P. Donoghue, C. Cai

This study resolves the Zoraptera placement in insect phylogeny, finding Zoraptera as the earliest-diverging polyneopteran order and providing a Devonian origin for winged insects.

bioRxiv · Sep 23, 2021 · PreprintZoology